Grimontia hollisae: AL542_16235
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Entry
AL542_16235 CDS
T04260
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
gho
Grimontia hollisae
Brite
KEGG Orthology (KO) [BR:
gho00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gho01002
]
AL542_16235
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gho01011
]
AL542_16235
Peptidases and inhibitors [BR:
gho01002
]
Cysteine peptidases
Family C82
AL542_16235
Peptidoglycan biosynthesis and degradation proteins [BR:
gho01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AL542_16235
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
Scaffold
Motif
Other DBs
NCBI-ProteinID:
AMG31733
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Position
1:2722882..2724513
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AA seq
543 aa
AA seq
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MFFSHTLFLTLFIYIAAPMSVIALEMTASPKSTSEPAIMWVQQVEPEPGVVAYTDDVARI
YEYFSFTPIWHDYRAKDELETQINIISLAGISQDFEWRAILLRELRTNGDWRAYDVFATD
SLLALISYIASIPEFGKSWYFGTDITQPLPSPTLTQSNKLIVYAGRNQLYDFVYDLRPDT
SQYRKMASAIVALQDNKSAHWAEFTQGGLVRLGDRLEDPGSLITNLERQGALSAYDAQRL
KRDQVNHYNATLVEAVKRFQENHGLKKDGVIGNNTRRWMNMSPSSRIQILALNMERLRLW
PTEREKIILVNIPNYEMEFWLDRKLILDSKVVVGRPSRRTPLFESRLDSVVFNPSWNVPV
KIMREDILPKVQQDNEYLNKHSYTVLSSWVNGSVISAEEIDWETVSPNSFPYRLQQSPGS
FNALGRYKFNTPNGNAIYLHDTPAKELFNKSRRAYSSGCIRVQKAEILAEILLNKSGKRL
GDYEYYQRIPETKWVSLRQKISVHTIYQTAWVEEGKVQFREDVYRYDARPKRKINLSLTA
QNH
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctcccatacgctttttttgacattgtttatatacattgctgctccaatgtca
gtcattgctttggaaatgacagcgtcgccaaaaagcacctcagagccagcgataatgtgg
gtccagcaagttgagcctgagcccggtgttgtcgcatatactgacgatgttgccagaatc
tacgaatacttttcgtttaccccaatctggcatgattaccgcgcgaaagacgagctcgaa
acccagatcaatattatctccctggcagggatcagccaagatttcgaatggagggcgata
ctccttcgcgaattgcgcacaaacggtgattggcgtgcctatgacgtgtttgccaccgat
agcctacttgcactgatcagttatatagcgtcgatacctgaattcggcaaaagctggtat
ttcggtacagatatcacccaacccttgccaagcccgacactcacacaatccaacaagctg
attgtttatgctggcagaaaccaactttatgattttgtgtatgatctccgtccggatacc
tcacaatatcgcaagatggctagtgcgatcgtggcgcttcaggacaacaaatcagcgcat
tgggcggaatttacacagggtggcctggttcggctgggagataggctggaagatcctggc
agcctgatcaccaatctggaacgtcaaggagcgctcagtgcgtatgatgcacagcgtctg
aaaagagatcaggtcaaccattacaacgccacgctggtggaggcagtgaaacgctttcag
gaaaaccatggcctgaaaaaagacggtgtgattggtaataacacccgccggtggatgaac
atgtccccatcatcccgcattcaaatacttgcccttaatatggagcgcctgcgcctttgg
ccgacggagcgtgaaaagatcatattggtcaacattccaaactacgaaatggagttttgg
cttgatcgtaaattgattcttgacagtaaagtggttgtcggaagaccaagcaggcgtacc
cccctgtttgaatcacgccttgattcggttgtttttaacccaagctggaatgtaccggta
aagatcatgcgcgaagatattttgcctaaagtgcaacaagacaacgaatacctgaacaaa
cattcttataccgtgctgagcagttgggtcaatggttcagtgatttccgccgaagagatt
gattgggaaaccgtcagccccaatagcttcccataccgcttgcagcaatcacccggcagc
tttaatgcgttggggcgctacaaattcaatacgcctaatggcaatgcgatttatctccat
gatacgccggcaaaagaactgtttaacaaatcccgccgggcttacagctccggttgtatt
cgcgtgcagaaagcagaaatcctggctgaaatactgctgaacaaatcaggtaaacgcctc
ggggattatgaatactaccaacgtattccggaaacaaaatgggtatcattgcgccagaaa
atcagtgttcatactatctaccagaccgcatgggtagaagaggggaaagtgcagtttagg
gaagatgtgtaccgctatgatgcgcgcccaaagcgaaagattaacctctctctgaccgcc
caaaaccattag
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