Gaoshiqia hydrogeniformans: ACOIT5_02405
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Entry
ACOIT5_02405 CDS
T11085
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ghy Gaoshiqia hydrogeniformans
Pathway
ghy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACOIT5_02405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghy03021
]
ACOIT5_02405
Transcription machinery [BR:
ghy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACOIT5_02405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_23
GerE
HTH_40
HTH_38
HTH_24
LRIF1
Xre-like-HTH
YpjP
PF0610-like_N
HTH_28
HTH_11
HTH_ParB
HTH_10
HTH_29
RPA_C
DUF3243
HTH_36
DUF3160
HTH_Tnp_ISL3
TnsD
DUF4745
IZUMO
Phage_terminase
IL12
Motif
Other DBs
NCBI-ProteinID:
XQW73658
LinkDB
All DBs
Position
572519..572893
Genome browser
AA seq
124 aa
AA seq
DB search
MISKQSLKIAVNSIYDLIRRKNIEQAFTEFASSMANQSDSTWQEVVFNDMLAQIHELMQQ
MPEQRRKIFQLSKESGLNNDEIAKNLGLSKRTVENQLYRATAFLKSKIKPDTLFLSLLLH
LFLS
NT seq
375 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaaaacagtctcttaaaattgcggttaacagcatctacgacctgatccgccgg
aagaacattgaacaggcttttaccgagtttgcaagcagcatggccaatcaatcggattca
acctggcaggaagttgttttcaacgacatgctcgcccaaattcacgaactgatgcagcaa
atgcccgaacaaaggcgcaaaatctttcaactgagcaaagaatccggtctgaacaatgat
gaaattgccaaaaatttaggcttatccaaacgaacggttgaaaatcagctttaccgggca
actgctttcctgaaaagcaaaataaaaccggacaccctcttcctgtcactcctccttcat
cttttcctaagctga
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