KEGG   Gaoshiqia hydrogeniformans: ACOIT5_03015
Entry
ACOIT5_03015      CDS       T11085                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ghy  Gaoshiqia hydrogeniformans
Brite
KEGG Orthology (KO) [BR:ghy00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    ACOIT5_03015 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghy03019]
    ACOIT5_03015 (rnc)
   03009 Ribosome biogenesis [BR:ghy03009]
    ACOIT5_03015 (rnc)
   03036 Chromosome and associated proteins [BR:ghy03036]
    ACOIT5_03015 (rnc)
Enzymes [BR:ghy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     ACOIT5_03015 (rnc)
Messenger RNA biogenesis [BR:ghy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ACOIT5_03015 (rnc)
Ribosome biogenesis [BR:ghy03009]
 Eukaryotic type
  90S particles
   RNase
    ACOIT5_03015 (rnc)
 Prokaryotic type
  rRNA processing factors
   ACOIT5_03015 (rnc)
Chromosome and associated proteins [BR:ghy03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     ACOIT5_03015 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2 LPP20 DUF4518_N Mycovirus_RNAse
Other DBs
NCBI-ProteinID: XQW73780
LinkDB
Position
complement(729281..730027)
AA seq 248 aa
MIRTLVQKIKLFSSSGKEFYLFLKSLIGRYPGNLKLYETALIHKSASKLDSQRNWVNNER
LEYLGDAILGAVIAEFLYNRFPNQDEGFLTQMRSKLVNRSFLTDLTYQTGLNNYIKSNTN
NTIENSHIYGDALEALIGALYLDKGYLITKEFIVKKLLLEYVDLKEVQSTNTNYKSQLIE
WSQKNKKEINFETTERLNGDARVPAFISVVTVEEEVIGRGEGSSKKESQQNASRKAIEQL
KKTHPVSF
NT seq 747 nt   +upstreamnt  +downstreamnt
gtgataagaacactcgttcaaaaaataaaactcttttcttcttcagggaaagagttttat
ttatttctgaagtccctgattggccgttatccgggcaacctgaaactttatgaaaccgcc
ctgattcacaaatcggcatccaagctggattcgcagcggaactgggtaaataatgaacgg
ctcgaataccttggagatgccatactgggcgccgtcatcgccgagtttctgtataaccgg
tttccaaaccaggatgaaggctttctcacacaaatgcggtcgaagctggtaaaccgcagt
tttttaaccgacctgacttatcaaaccggcctgaacaactacattaagtcaaacaccaac
aacaccatcgaaaacagccacatatacggcgatgcactggaagcgctgatcggcgccctt
taccttgataaaggttatctgattaccaaagaattcattgttaaaaagcttttgctggaa
tatgtcgatctgaaagaagtacaatcgacaaacaccaactataaaagccagttgattgaa
tggagccagaaaaataaaaaagaaatcaatttcgaaactaccgaacggctaaacggcgat
gcccgcgtacccgcgttcatttcggtagtcaccgtcgaagaggaagtgattggacgaggc
gagggaagctccaaaaaagaatcgcagcaaaacgcatcccggaaagcgattgaacaactg
aaaaagacacacccggtttcgttctaa

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