Gaoshiqia hydrogeniformans: ACOIT5_04090
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Entry
ACOIT5_04090 CDS
T11085
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ghy Gaoshiqia hydrogeniformans
Pathway
ghy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACOIT5_04090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghy03021
]
ACOIT5_04090
Transcription machinery [BR:
ghy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACOIT5_04090
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
HTH_23
PF0610-like_N
HTH_28
HTH_24
HTH_38
HTH_40
HTH_10
Terminase_5
HTH_5
DNA_pol3_delta_C
Cullin_binding
TPR_INTS8_2
HTH_11
HTH_7
NPHP3_N
HTH_30
Motif
Other DBs
NCBI-ProteinID:
XQW73982
LinkDB
All DBs
Position
972691..973260
Genome browser
AA seq
189 aa
AA seq
DB search
MDGNKLAKQLKLGGKQAINDLYGAYSSRLYRFAFGYLKSEEDARDVIQEVFIRLWNKRNE
LKDDTNMEAFLFTLAKNTVISLFRKKISEKDYLEQLRYLVVKNSSDTENQVNYKLLSEKV
TQLISRLPEQRRRIFLLSKEKGYPNKSIAEELHISVKTVEDHLSKARKFLKNNLDEYGFL
AILFYEMFI
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggacggaaacaaactggcaaagcagctcaaattgggcggcaaacaggcgataaacgac
ctttacggcgcctacagcagccggctttatcgttttgcctttggctacctgaaatcggaa
gaagacgcgcgggatgtgatccaggaggtatttatccggctgtggaacaagcggaacgag
ctgaaagacgatacgaacatggaagcttttcttttcacactggcaaaaaacacggtcatc
tctcttttccgaaagaaaatttcggagaaagactacctggaacaactccggtacctggtg
gtaaaaaacagttccgacaccgagaatcaggtcaattataagttgttatccgaaaaagtg
acacagctcatttcgcgattacccgaacaacgaaggcgtatttttcttctaagcaaagaa
aaaggttacccgaacaagtcgattgccgaagaacttcacatttcggtgaagaccgttgaa
gaccacctgagcaaagcccggaaatttttaaagaataatttagacgaatatgggtttctg
gcgattctgttttatgagatgtttatttag
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