Gaoshiqia hydrogeniformans: ACOIT5_04420
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Entry
ACOIT5_04420 CDS
T11085
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ghy Gaoshiqia hydrogeniformans
Pathway
ghy00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ACOIT5_04420 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ghy01007
]
ACOIT5_04420 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghy03016
]
ACOIT5_04420 (lysS)
Enzymes [BR:
ghy01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
ACOIT5_04420 (lysS)
Amino acid related enzymes [BR:
ghy01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ACOIT5_04420 (lysS)
Transfer RNA biogenesis [BR:
ghy03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
ACOIT5_04420 (lysS)
Prokaryotic type
Other AARSs
ACOIT5_04420 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF4332
Motif
Other DBs
NCBI-ProteinID:
XQW74048
LinkDB
All DBs
Position
complement(1066765..1068486)
Genome browser
AA seq
573 aa
AA seq
DB search
MSIAELSEQEIIRRNSLAKLRESGIEPYPAEEYPVNTKTAEIREQFEPEAGNYQDVVLAG
RIMSQRIMGKASFAELQDDTGRIQLYINRDEICPGDDKSLYNEVFKKLFDIGDIIGVKGF
AFITQVGEKSVHVKELKLLSKSLRPLPVVKEKDGVTYDAFTDVEQRYRQRYVDLIVNPQV
KDVFLKRTKIINTMRAMFNEKGYLEVETPILQAIPGGAAARPFITHHNSLNIPLYLRIAN
ELYLKRLIVGGFEGVYEFAKDFRNEGMDRTHNPEFTVMEIYVAYKDYKWMMNFTEEMVER
VALALHGKTEVQVGDKLIDFKRPYPRVTMYEAIKEHTGYDIAGKSEDELRMICAELGIET
DPSMGKGKLIDELFGEKCEHHYIQPTFIIDYPVEMSPLTKKHRDQAGLTERFELMVNGKE
LANAYSELNDPIDQRERFEDQMKLSEKGDDEAMFIDQDFLRALEYGMPPTSGMGIGIDRL
TMFMTNSPSIQDVLFFPQMKPEKKADTDPDEKFEVLGVPGDWVDVLKKMGFKKVDALKEV
KAGKLFNDLCGYNKKNKLGLENPSMDDVKQWLA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgagtatagcagagctgagcgagcaggagatcatccggcggaattcactggcaaaatta
cgcgagtcaggaattgaaccctacccggctgaagaatatccggtgaatacaaaaacagca
gaaatcagggagcagtttgaacctgaagcaggaaactatcaggatgttgttctggcaggc
aggatcatgagtcagcgaattatgggaaaagcatcttttgcagagctgcaggacgatacc
ggacgtattcagttgtacattaaccgcgatgaaatttgccccggcgacgacaaatccctc
tataacgaagtctttaaaaagttattcgatattggcgatattattggagtgaaaggtttt
gcttttatcacgcaggtaggcgagaaatcggttcatgtcaaagaactgaagttgctgagc
aaatcgttgcggccgcttcctgtggtgaaagaaaaggatggggtaacttatgatgcgttt
accgacgtggaacaacgttaccgccagcgttatgtcgatctgattgtcaacccgcaggtg
aaagatgtttttctgaaacgaacgaaaatcatcaataccatgcgcgcgatgttcaacgag
aagggatacctcgaagttgaaacgcccatcttgcaagccattccgggtggcgctgctgca
cgtccgttcattacccatcataattcgctgaacattccgctgtacctgcgtattgcgaac
gagctttacctgaaaaggctgatcgttggcggtttcgaaggtgtttatgaatttgccaag
gatttccgcaatgaagggatggaccggacacacaaccccgagtttaccgtcatggaaatt
tatgtcgcttataaagactataagtggatgatgaatttcacggaagaaatggtggaacgc
gtggccctggccttacacggaaaaacagaagtgcaggtcggcgataagctgatcgatttt
aaacgtccgtatccgcgtgtgaccatgtacgaagccataaaagaacataccggttacgat
attgccgggaaatcggaagacgaactccgtatgatttgcgccgagctgggaatcgaaaca
gatccgagtatgggaaaaggcaagctgattgatgaactgttcggcgaaaaatgcgaacat
cactatattcaaccaaccttcatcatcgattatccggtcgaaatgtcaccgctgaccaaa
aaacaccgcgatcaggccggtttgaccgaacggtttgagctgatggtcaacgggaaggag
ctggccaatgcttattcggaactgaatgacccgattgaccaacgcgaacgtttcgaggat
cagatgaaactctctgaaaaaggagacgatgaagcgatgtttatcgatcaggactttttg
cgggccctcgaatatggtatgccgccaacatcgggtatgggaatcgggatcgaccgcctg
accatgtttatgaccaacagcccgtcgattcaggatgttttgttctttccgcaaatgaaa
ccggagaaaaaagccgacaccgaccccgatgaaaaatttgaagtgttgggggttcccggc
gattgggtggatgtgcttaaaaagatggggtttaaaaaagtggatgcgttaaaagaagtg
aaagccggaaagctcttcaacgatctttgcgggtacaataaaaaaaataaactgggattg
gaaaatccctcaatggacgacgtgaagcaatggctcgcgtaa
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