Gaoshiqia hydrogeniformans: ACOIT5_06215
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Entry
ACOIT5_06215 CDS
T11085
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ghy Gaoshiqia hydrogeniformans
Pathway
ghy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACOIT5_06215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghy03021
]
ACOIT5_06215
Transcription machinery [BR:
ghy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACOIT5_06215
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
GerE
HTH_23
HTH_28
Sigma70_ECF
PhyR_sigma-like
CobA_CobO_BtuR
SusR_C
HTH_Tnp_ISL3
HTH_29
HTH_38
HTH_Tnp_IS1
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
XQW74396
LinkDB
All DBs
Position
complement(1530098..1530727)
Genome browser
AA seq
209 aa
AA seq
DB search
MKMELSKDTFEENRETELDSIQKLNNGDPKALKLFFDGFYPSVCVYAIRFIKQSDVAEDI
AQDAFVQFWKIRDHFTSIRKIRAFIYTTVRNACINHLKQKKTREDILAHNPIIEELSYEL
LIEEEVYRLLDAAIQQLPNRTREIILLALQGHNNTEIAEILGVSINTIKTLKKNAYVDLR
HMLSNQAYLFFLLKYSGLLFPVLDSLFAS
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggagctgagtaaagatacatttgaagaaaacagagagacggagctcgattcg
atccaaaagctaaataatggtgaccccaaggcattaaaacttttttttgatggcttttat
ccttcggtttgcgtttatgccattagatttatcaaacaatctgatgttgcagaagatatt
gcccaggatgcctttgttcagttttggaaaatcagagatcattttaccagtatccggaag
atccgggcgtttatttacactacggtacggaacgcatgtatcaaccatttgaaacagaaa
aagacaagagaggatattcttgcccataacccaataattgaagagttatcctatgaatta
ttgatcgaagaggaagtctatcggttactggacgccgccattcagcagttaccaaaccga
accagggaaattattctgctggcccttcaggggcataacaacacggaaattgctgagata
ttgggcgtttcaatcaacacaattaaaacactgaaaaagaatgcttacgtcgatttgagg
catatgctcagtaatcaagcctatctttttttccttctgaagtactccggtctcctgttt
cccgtcctcgattccctttttgcatcttga
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