Gaoshiqia hydrogeniformans: ACOIT5_06785
Help
Entry
ACOIT5_06785 CDS
T11085
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ghy Gaoshiqia hydrogeniformans
Pathway
ghy03030
DNA replication
ghy03410
Base excision repair
ghy03420
Nucleotide excision repair
ghy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACOIT5_06785 (polA)
03410 Base excision repair
ACOIT5_06785 (polA)
03420 Nucleotide excision repair
ACOIT5_06785 (polA)
03440 Homologous recombination
ACOIT5_06785 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghy03032
]
ACOIT5_06785 (polA)
03400 DNA repair and recombination proteins [BR:
ghy03400
]
ACOIT5_06785 (polA)
Enzymes [BR:
ghy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACOIT5_06785 (polA)
DNA replication proteins [BR:
ghy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACOIT5_06785 (polA)
DNA repair and recombination proteins [BR:
ghy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ACOIT5_06785 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACOIT5_06785 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
XQW74509
LinkDB
All DBs
Position
complement(1687704..1690490)
Genome browser
AA seq
928 aa
AA seq
DB search
MPENNNPQKRLFLLDAYALIYRSYFAFIKNPRFNSKGLNTSAMLGFTNTLEQLLSKENPT
HLAVVFDVHAPTFRHRMFEAYKATREEMPEDLRKAIPWVRKITEAYQIPILEKEGFEADD
VIGTLAKKAEKEGYTVYMMTPDKDYAQLVSEHIFMYKPGRGTNENEIWGVPEVQENFEVQ
NPEQVIDILALMGDTADNIPGCPGVGPKTAMKLISTYGSVDGLYEHIGELKGKLKENLVE
FEEQVRLSRKLAEIIQDVPVGFDESRLVMEEPDWKKLREIFTELEFRNLVQKLGTAQQPQ
AAPNFEQGTLFGAAEPAAPVVRTDLANIENTPHEYYLVENAMQRASLRAELSVQEEFCFD
TETTGLDTHLAELVCLSFSFRKGEAFCVTLPENREEATKIVGEFRLIFEDEKIRKIGQNI
KYDILMLLAYGVEVKGPLYDTMIAHYLIQPELRHNLDYLCETYLGYLKVETESLIGKKGK
SQQTMRQASLEKLKDYACEDADLTLQLKFAIDPELDRTGVRAVFEEIEMPLIPVLADMEM
TGVTLNTNELDAYAKVLRVQLVELEKEIRELAGEDFNLSSPKQLGPILFEKLKIDSNAKK
TKTRQYSTSEEVLAKLLDKHPIVGKILDFRGLKKLLSTYVETLPQLVNPRTGKVHTSYNQ
AIAATGRLSSTNPNLQNIPIRDENGREIRKAFTASDENHLFLSADYSQIELRIMAALSKD
EQMIGAFRDNQDIHAITAAKIYKIPLSEVTSDMRRKAKTANFGIIYGISAFGLSERLTIS
RTEAKELIDGYFANFSQVKNYMDESIRVARDHGYVETIKGRRRYLNDINSANAVVRGVAE
RNAINAPIQGSAADIIKLAMINIWRELRRQKLQAKMILQVHDELNFDVPKAELEQVKQIV
KEQMEQAVDIGLPLTVEMNAAPNWLEAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaacaacaatccacaaaaaaggcttttcttattggatgcttacgcgttgatt
taccgttcgtattttgccttcattaagaatccccggttcaactcaaaagggttgaacacc
tcggcgatgcttggttttaccaatacgctggaacaattgctgagtaaggaaaatcccacg
cacctggccgtggtttttgatgtgcatgccccgacattcaggcaccggatgtttgaagcg
tacaaagcgacccgtgaggagatgcccgaagatttgcgcaaggctatcccctgggtgcga
aaaattaccgaagcctaccagatccctattctcgagaaagagggttttgaggccgacgat
gtgatcggcacccttgccaaaaaggcggagaaggaaggttacacggtgtatatgatgacg
cccgacaaggattacgcccagttggtttcggagcatattttcatgtataaaccggggcgc
gggaccaatgagaatgaaatttggggagttccggaagtgcaggagaattttgaagtccag
aatccggaacaggtgattgatattctggcgctgatgggcgatacggccgacaatatcccg
ggctgccccggtgttgggcccaaaacggccatgaaactgatttcaacttacggatcggtc
gacggtctgtatgagcatatcggcgaattaaaaggcaaactgaaagaaaatctggttgag
tttgaagagcaggtccgcttgtcgcgtaaactcgccgaaattattcaggatgtaccggtc
ggattcgacgaatccaggctggtgatggaagagccggattggaaaaaactgagagaaatc
ttcactgagctggagtttcgaaacctggtacagaaactgggtactgcgcaacaaccgcag
gcggcccccaattttgagcagggaactttatttggagcggctgagccggcggcgccggtt
gtgcgaaccgacctggcaaacatcgaaaacacgccgcacgagtattatctggtagaaaat
gccatgcagcgtgccagcctgcgcgccgagttgtcggtacaggaagagttttgttttgat
acggaaacaaccgggctggatacccacctggctgaactggtttgcctgtcgttttcgttt
cgtaaaggcgaggctttttgtgtaacccttccggaaaaccgcgaagaagcaacaaaaatt
gtcggggagttccggctgatttttgaagatgaaaaaatccgtaaaatcgggcagaatatc
aaatacgacatcctgatgctgctggcttacggcgtggaggtcaaaggacccttgtacgat
accatgattgcccattacctgatccagcctgagttgaggcataacctggattacctgtgc
gaaacctacctcggctacctgaaggttgaaacggaaagcctgatcggcaagaagggcaaa
agccaacagaccatgcggcaggcatcgttggagaagttaaaggattatgcctgcgaagat
gccgacctgaccctgcaactgaagtttgccattgacccggaactggaccggaccggtgta
cgcgctgttttcgaagaaattgaaatgccgctgatcccggtgctggccgacatggaaatg
accggggtaacgctgaacaccaacgagttggatgcgtatgccaaagtacttcgggtacaa
ctagtcgaactcgaaaaagaaatcagggaactggccggtgaagattttaacctgtcgtca
cccaagcagttggggccgatcctttttgaaaaattaaagatcgacagcaacgcgaaaaaa
accaaaaccaggcagtattccacatccgaagaggtactggccaagctgctcgacaaacac
ccgatcgtgggaaagatcctggacttcagggggctgaagaagttattgtcgacctatgtt
gaaacattaccccaactggttaatccccggaccgggaaagtgcatacctcgtacaaccag
gcgattgccgctaccgggcggttaagttcgaccaacccaaacctgcaaaacatccccata
cgcgatgagaacggccgcgagatccgtaaagcgttcacagcatctgatgagaatcacctg
tttttgtcggccgactattcgcaaattgaattgcgcattatggccgccctgagcaaggac
gagcaaatgatcggggctttccgggataaccaggacattcacgccatcacggcagcaaaa
atttataaaattccgttaagtgaagtaacttccgatatgcgccgaaaagccaagaccgcc
aattttgggattatttacggtatttcggctttcgggctttccgaaaggctgactatttcg
cgcacggaagccaaagagctgatcgacggctattttgccaacttcagccaggtaaaaaac
tatatggacgaaagcatccgggttgcccgcgatcatggttacgtggaaaccatcaaagga
cggcgccggtatttgaacgacatcaattcggccaatgccgtggtgcgcggtgtggccgag
cggaatgccatcaatgccccgatccagggctcggctgccgatatcatcaaactggctatg
atcaacatctggcgcgaattacgccgtcagaaacttcaggctaaaatgattttgcaggta
cacgacgaattgaactttgatgtgcccaaagcggagttggaacaggtgaaacaaattgtg
aaagaacagatggaacaggcggtggatatcggcttgccgttgaccgttgaaatgaatgct
gcgcccaactggctcgaagcgcattaa
DBGET
integrated database retrieval system
