KEGG   Gaoshiqia hydrogeniformans: ACOIT5_08760
Entry
ACOIT5_08760      CDS       T11085                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
ghy  Gaoshiqia hydrogeniformans
Pathway
ghy02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ghy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ACOIT5_08760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ghy03021]
    ACOIT5_08760
Transcription machinery [BR:ghy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ACOIT5_08760
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_24 HTH_40 GerE HTH_Mga MarR DUF2774 MarR_2 HTH_28 HTH_38 HTH_AsnC-type HTH_Tnp_ISL3 CARDS-D2_trefoil HTH_11 DUF6943 HTH_10 HTH_23 HTH_36 FeoB_Cyto DUF8612
Other DBs
NCBI-ProteinID: XQW74897
LinkDB
Position
complement(2183375..2183971)
AA seq 198 aa
MPKLDHVLFKQVKNHSDQKSFESIYHAYYSALCSYAYGIVKNQEDARDIVNDCFLECWNK
RGDIEIKSSLKSYLYISVRNMAINFLSKNKLKQKYLSAQSYPFYLQEEVAAQVEKLQQIE
ALEERLKNAMDSLPRQCRYIFYLNRYEHMSYKEIAKKMNLSAGTVKTQIARALKRIRADF
EDIKAIDQILFLILVRHF
NT seq 597 nt   +upstreamnt  +downstreamnt
atgccaaaactggatcatgtactttttaagcaggttaaaaatcatagcgatcaaaaatcc
tttgaatctatttaccatgcctattattcagccctttgttcctatgcttacggaattgta
aaaaatcaggaagatgccagagacattgtgaatgactgttttttggaatgctggaataaa
cgtggtgacattgaaattaaatcttccctgaagtcgtatctctatatttcagtcagaaat
atggcgatcaattttttaagcaaaaataaattaaaacagaaatatctctccgcccaatcc
tatcctttttatttacaggaagaagttgctgcacaagttgaaaaactccagcaaattgaa
gcgctggaagaaaggttaaagaatgcgatggactctttgccccggcaatgccggtatatc
ttttacctgaaccggtacgaacatatgagctacaaggagatcgccaaaaagatgaacctc
tcggcgggaactgtaaagacccagattgcgcgtgcactaaaaagaattcgtgctgatttt
gaagacattaaggctattgatcaaattttgttcctgattcttgtacgccatttttaa

DBGET integrated database retrieval system