Gaoshiqia hydrogeniformans: ACOIT5_08785
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Entry
ACOIT5_08785 CDS
T11085
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ghy Gaoshiqia hydrogeniformans
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghy03016
]
ACOIT5_08785 (truB)
Enzymes [BR:
ghy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACOIT5_08785 (truB)
Transfer RNA biogenesis [BR:
ghy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACOIT5_08785 (truB)
Prokaryotic type
ACOIT5_08785 (truB)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
LysM_OapA
RST
Motif
Other DBs
NCBI-ProteinID:
XQW74902
LinkDB
All DBs
Position
complement(2188080..2188793)
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AA seq
237 aa
AA seq
DB search
MGIKPGNYDFQQGEILLFDKELEWTSFDLVQKVRNKLCRALGVKKLKVGHAGTLDPKASG
LMILCTGKATKQIESLQAETKEYIATLKLGATTPSFDLETEEDAQFQTEQITRERFINTL
QKFTGEQLQVPPLFSAVKVEGKRAYTHARKGQEVKLNAKLIDIREIELLEFSNQQATIRV
VCSKGTYIRALARDIGNELNSGAYLIGLRRTKIGRFNVEEAMSINYFLENLQLFVTN
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggggataaaacccgggaactacgactttcagcagggagagatcttacttttcgacaaa
gaattggagtggacatcgtttgacctggtgcaaaaagtccgcaataaactatgcagggcg
ctgggcgttaagaaactcaaagtaggccatgccggcaccttagaccccaaagcaagcggc
ctgatgatcctttgtaccggaaaagcaaccaagcaaattgaaagtctgcaagccgaaacg
aaagaatacatcgcgaccttaaagctgggggcaacaacgccttcgttcgacctggaaacg
gaagaagacgcccaatttcagacagaacagatcacccgcgaacggtttataaacacctta
cagaaatttaccggtgaacagttgcaggttccgcccctgttcagcgccgtcaaggttgaa
ggtaaacgggcctatacccatgcccgtaaaggacaggaggtgaagctaaacgccaaatta
atcgatatccgggagattgaattactcgaattttcaaatcaacaggcaacgatccgtgtg
gtttgcagtaaagggacctacattcgtgctttggcccgcgatattgggaacgaattaaac
agcggagcctatttgatcgggttaagacgtaccaaaataggacgctttaacgtagaagaa
gccatgagtatcaattattttttagaaaatttacaactttttgtaaccaattag
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