KEGG   Gaoshiqia hydrogeniformans: ACOIT5_09280
Entry
ACOIT5_09280      CDS       T11085                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
ghy  Gaoshiqia hydrogeniformans
Pathway
ghy02020  Two-component system
Brite
KEGG Orthology (KO) [BR:ghy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ACOIT5_09280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ghy03021]
    ACOIT5_09280
Transcription machinery [BR:ghy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ACOIT5_09280
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF Sigma70_r4 GerE HTH_40 HTH_24 HTH_10 PhyR_sigma2 HTH_5 BOS1_GOSR2_MEM11-like_N V-SNARE_C HTH_36
Other DBs
NCBI-ProteinID: XQW75001
LinkDB
Position
2303236..2303832
AA seq 198 aa
MTKNDKQLFCLLLNGDEASFKVVYQYFYPRLYYFVLEYLPHREVAEDVVHDTFLTLWQKR
ADLQADSNLNAYLYTLAKNNSLKKLRDERYRQKLLQSPKLHPLELELNAAALMRLETSES
DFSEIEQLVQATLEQLPPQCRQVFELSRFAHKKNREIADELGLSVKTVEGHITKAIKLLK
INLKDYLPLLGFFFIGVR
NT seq 597 nt   +upstreamnt  +downstreamnt
atgacaaaaaatgataaacaacttttctgcctgttgctgaatggagatgaggcttctttt
aaagttgtttatcagtatttctacccccggttgtattattttgtgctggagtatcttccg
catcgcgaggtggccgaagatgtggtgcacgacacctttctgaccttgtggcagaagcgg
gccgacttgcaggccgacagcaacctgaatgcctacctgtataccctggccaaaaacaac
agcctgaaaaaactgcgcgacgaacgctaccgtcagaagctgttgcagtcgcctaaactt
catccgctggaactggagttgaacgccgccgccctgatgcggctggaaaccagcgaaagt
gatttctctgaaattgagcaactcgtacaggccaccctggaacagcttccgcctcaatgc
cgccaggtattcgaactgagccgctttgcccacaagaaaaatcgcgaaatagccgatgag
ctgggcctttcggtcaaaacggtggaaggacacatcaccaaagccatcaaactacttaaa
ataaacctgaaagattatctgccgctgctgggcttctttttcattggtgttcggtag

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