Gaoshiqia hydrogeniformans: ACOIT5_09280
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Entry
ACOIT5_09280 CDS
T11085
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ghy Gaoshiqia hydrogeniformans
Pathway
ghy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACOIT5_09280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghy03021
]
ACOIT5_09280
Transcription machinery [BR:
ghy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACOIT5_09280
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
HTH_40
HTH_24
HTH_10
PhyR_sigma2
HTH_5
BOS1_GOSR2_MEM11-like_N
V-SNARE_C
HTH_36
Motif
Other DBs
NCBI-ProteinID:
XQW75001
LinkDB
All DBs
Position
2303236..2303832
Genome browser
AA seq
198 aa
AA seq
DB search
MTKNDKQLFCLLLNGDEASFKVVYQYFYPRLYYFVLEYLPHREVAEDVVHDTFLTLWQKR
ADLQADSNLNAYLYTLAKNNSLKKLRDERYRQKLLQSPKLHPLELELNAAALMRLETSES
DFSEIEQLVQATLEQLPPQCRQVFELSRFAHKKNREIADELGLSVKTVEGHITKAIKLLK
INLKDYLPLLGFFFIGVR
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaatgataaacaacttttctgcctgttgctgaatggagatgaggcttctttt
aaagttgtttatcagtatttctacccccggttgtattattttgtgctggagtatcttccg
catcgcgaggtggccgaagatgtggtgcacgacacctttctgaccttgtggcagaagcgg
gccgacttgcaggccgacagcaacctgaatgcctacctgtataccctggccaaaaacaac
agcctgaaaaaactgcgcgacgaacgctaccgtcagaagctgttgcagtcgcctaaactt
catccgctggaactggagttgaacgccgccgccctgatgcggctggaaaccagcgaaagt
gatttctctgaaattgagcaactcgtacaggccaccctggaacagcttccgcctcaatgc
cgccaggtattcgaactgagccgctttgcccacaagaaaaatcgcgaaatagccgatgag
ctgggcctttcggtcaaaacggtggaaggacacatcaccaaagccatcaaactacttaaa
ataaacctgaaagattatctgccgctgctgggcttctttttcattggtgttcggtag
DBGET
integrated database retrieval system