Gaoshiqia hydrogeniformans: ACOIT5_09850
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Entry
ACOIT5_09850 CDS
T11085
Name
(GenBank) HU family DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
ghy Gaoshiqia hydrogeniformans
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghy03032
]
ACOIT5_09850
03036 Chromosome and associated proteins [BR:
ghy03036
]
ACOIT5_09850
03400 DNA repair and recombination proteins [BR:
ghy03400
]
ACOIT5_09850
DNA replication proteins [BR:
ghy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ACOIT5_09850
Chromosome and associated proteins [BR:
ghy03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ACOIT5_09850
DNA repair and recombination proteins [BR:
ghy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ACOIT5_09850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HU-HIG
Bac_DNA_binding
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
XQW75115
LinkDB
All DBs
Position
2473638..2473883
Genome browser
AA seq
81 aa
AA seq
DB search
MIELEAGVQLVLSQLLDELADGNHVCIEGFGTFSVSAKAVRAAIEQHDIRAESIRLKRIV
FKTSKTLLKQTSFRFQRKPEP
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atgattgaactggaggccggcgtgcaactggtgctgagccagctgctcgacgaactggcc
gacggcaatcatgtttgcatcgaagggtttggaactttttccgtgagcgccaaagctgtc
cgcgcggccatagaacagcatgacatccgcgcagaatcgatccgtttgaaacgcattgtt
ttcaaaacctcgaaaacattgttgaagcaaacaagtttccggtttcagcggaagccggaa
ccataa
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integrated database retrieval system
