Gaoshiqia hydrogeniformans: ACOIT5_11100
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Entry
ACOIT5_11100 CDS
T11085
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ghy Gaoshiqia hydrogeniformans
Pathway
ghy00550
Peptidoglycan biosynthesis
ghy01100
Metabolic pathways
ghy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACOIT5_11100 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ACOIT5_11100 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ghy01011
]
ACOIT5_11100 (mrdA)
Enzymes [BR:
ghy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ACOIT5_11100 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ghy01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
ACOIT5_11100 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
XQW75359
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All DBs
Position
complement(2793874..2795700)
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AA seq
608 aa
AA seq
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MDKFAKRKYILAAIFLAVAVVFILKLFSLQVLESSYKQYATRNVLRRVINYPARGLIYDR
NGKLLVYNKAAYDLLVTPRELTTFDTTGLCSILKIDKSELIDGINKAKKYSRYKPSVIVK
QISPEVYAVLQEKLFKYPGFFAQSRTLREYPQKIAAHMLGYVGEVDKAAIEKDPYYAQGD
YIGITGLERTYEKELRGTKGVNFFMVDVHNRIKGAYREGKSDTISVLGKNLISTIDADLQ
LYAEQLMQNKRGAVVAIEPQTGEILCYYSGPAYDPNLLVGRERSANYQILLGDTLKPLTN
RAISAAYSPGSTFKTLNALIALEEGTINEQTSVSCHGTVSSPIRCTHSHESPISLKSAIR
ESCNPYFWNTFRSIISKYPTAEQGYNKWQSHIKSFGLGETLGNEFYGQSTGNIPNSSYYD
RYFGQKRWNALTIRSLSIGQGEIIITPLQMANMVTVIANRGYYIEPHLIRSVADKDGTVN
QLQFERKNATVSADHYETVIEGMQQVIDFTNTRYTAHVDGISICGKTGTIQNAHGSDHSA
FIAFAPKDDPKIAIAVFIEFGVWGARHAAPVASLIIEKYLTGTITANNRKLTEQRMLDAN
LLNPIQPK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtggacaaatttgccaagcgaaaatatattttagcagccatttttttagccgttgcggtg
gtcttcatcctgaaacttttttcgctacaggtattagaaagttcgtataagcaatatgcc
acccgaaacgtactgcgacgggtaatcaactatcccgcacggggattgatttacgaccgg
aacgggaaattgctggtttacaataaggcagcttacgacttactggtcacgccgcgcgaa
ctgacaacctttgatacgactggattgtgcagcatactgaaaatcgataaatcggagctg
attgacggaattaacaaagcaaaaaaatactcgcggtacaagccatcggtgatcgtaaaa
cagatctcacccgaagtatatgccgttttacaggaaaaactattcaaataccctggcttt
tttgcacaaagccgtacactcagggaatatcctcagaaaattgcagcccatatgcttggt
tatgtcggcgaagttgataaagctgcgattgaaaaagacccgtattatgcccaaggcgat
tacatcgggataacggggcttgaacgcacgtacgagaaagaattacgcggaaccaaaggc
gttaactttttcatggtcgatgtacacaaccggattaaaggcgcctaccgcgaaggaaaa
agcgataccatatcggtgctggggaaaaatctcatttcgaccatcgacgccgacttacag
ctttatgccgagcaactgatgcagaacaaacgcggggccgtggttgctattgaaccccaa
acaggagaaattctgtgttactacagcggcccggcctacgatcccaatttgctggttggg
cgcgaacgctccgccaactaccagatcctgctgggagataccttgaaaccactgaccaac
cgcgccatctcggcagcttattcaccggggtcaacctttaaaacgctcaatgcgctcatc
gccctggaagagggcacaatcaatgaacagaccagcgtgagttgtcatggcacagtatcc
agcccgatacgttgtacccacagccacgaaagcccgatcagcctgaaaagcgcgatccgc
gaatcctgcaatccttatttctggaatacattccggtcgatcatctcgaaataccctaca
gccgagcaggggtacaacaaatggcaatcgcacatcaaaagtttcgggctgggcgaaacc
ctgggaaatgagttttacggccaatccaccgggaacattcccaactcttcatactacgac
cgttattttggccaaaaacggtggaatgccttaaccatccgttcgttatcgatcggacag
ggtgaaatcattatcactcccttgcaaatggccaacatggttaccgtgattgccaaccgg
ggatattatatcgaacctcacctgatcagatcggtagccgataaagacgggaccgttaat
caattacaattcgagcgaaaaaacgccaccgtcagcgccgatcattatgaaacagtgatt
gaagggatgcagcaggtaattgactttaccaacacccgttacacggctcatgttgacggc
atttccatttgcgggaaaacgggaacgatccagaatgcacatggttctgaccattcagcc
ttcatcgctttcgcgcctaaagatgatcccaaaattgccattgccgtttttattgaattt
ggcgtatggggggccaggcatgctgccccggtggccagcctgattatcgaaaaatacctg
accggaaccattacggccaataaccggaaactgacagagcaacgcatgcttgatgcgaat
ctattaaacccaattcaacccaaatag
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