Gaoshiqia hydrogeniformans: ACOIT5_11335
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Entry
ACOIT5_11335 CDS
T11085
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ghy Gaoshiqia hydrogeniformans
Pathway
ghy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACOIT5_11335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghy03400
]
ACOIT5_11335
Enzymes [BR:
ghy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ACOIT5_11335
DNA repair and recombination proteins [BR:
ghy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACOIT5_11335
Prokaryotic type
ACOIT5_11335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Pardaxin
Motif
Other DBs
NCBI-ProteinID:
XQW75405
LinkDB
All DBs
Position
complement(2838916..2839578)
Genome browser
AA seq
220 aa
AA seq
DB search
MDVKIEASWKNLLTSEFEKPYFDNLTKFVHEEYRNHQVFPPARLIFNAFDQCSFDQLKVV
ILGQDPYHGPGQAHGLCFSVNDGIEFPPSLRNIFKELQSDVGKAIPSSGNLTDWAQQGVL
LLNATLTVRAHQAGSHQKKGWEEFTDAVIHKINEKKEHVVFILWGSYAIRKGELINQTKH
LVLTSVHPSPLSASRGFFGNKHFSRTNAFLLQHGLKPINW
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggatgttaaaattgaagccagttggaaaaacctgctaactagtgaatttgaaaagccc
tattttgataacctcaccaaatttgtgcacgaagaataccgaaatcatcaggttttccct
ccggccaggctcattttcaacgcgtttgaccaatgctccttcgatcagctgaaagtggtc
attcttggtcaggacccgtatcacggaccgggacaggcgcatggtttgtgtttttcggta
aacgacgggatagagtttccgcccagcctgcgcaatatctttaaagaactgcaaagcgat
gtgggcaaagccatcccgtcgagcggcaatttaactgactgggcccaacaaggcgtattg
cttttaaatgccacgctaaccgtacgcgcccaccaggctggctcgcaccaaaaaaaaggc
tgggaagaattcaccgatgccgtcattcataaaatcaatgagaaaaaagaacacgtggtg
ttcattttgtggggcagttacgcgatcagaaaaggtgaattaatcaaccaaaccaaacac
ttggtgctgacttcggtgcacccctctcccctgtcggccagtcgcggtttttttggcaac
aaacatttcagcagaaccaacgcgttcctgttacagcacggcttgaaaccaattaattgg
tag
DBGET
integrated database retrieval system
