Gaoshiqia hydrogeniformans: ACOIT5_11635
Help
Entry
ACOIT5_11635 CDS
T11085
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
ghy Gaoshiqia hydrogeniformans
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghy02000
]
ACOIT5_11635
Transporters [BR:
ghy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
ACOIT5_11635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_12
VipD-like_C
DUF1428
Motif
Other DBs
NCBI-ProteinID:
XQW71067
LinkDB
All DBs
Position
complement(2910714..2912315)
Genome browser
AA seq
533 aa
AA seq
DB search
MRTKLIYLIAVLFNMGIFTACESLLDDVEQQGTTSIENFYKTDSDAEEAIASVYFQWRSQ
AFNDFFLKNTLSDDIYSGGGSRGDNSTLEQLSEYRFSTSNSTMSDYFSGLYTLIYRSNLV
INNFTDDTEAKRRAIAEAKVARGWAYLNLVTLWGPVPFVTSQLAPSEYQQPNGTLSEIWG
QIETDLSEAAASGALPEKASEADKSVGGRLSKQAALSFLGKAQVFQGKYSEAATTLKSVI
NSGKYKLIDNYENVLRKVEDFGPENIFEVNSINDGENAFNQGTTILGNMYGWRSDRLNLN
GYWFGAHDLYPGGWGFANPRENLYNAFVEMEGTAGYRLNATVKTYQQVMTIGAPAAPVTV
NAGTSLYGHEGYFNWKWRFLGSEVIPNSWGLATDNNYRIMRYAEVLLLAAESCLLSGDGE
NALNYINQIRNRAQLPALSAVTLDDIKKEKRLELCIEQVRFQDLVRWGDAATALAEQGKQ
VPVFTGLREDGTHNVSYPYSNTAYGFKAGKHELLPFPEHEMNVNSNLTQNTGW
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaaattaatatacctgatcgctgtcttattcaatatggggatttttactgct
tgtgaaagcctgttggatgatgtggaacaacaagggaccacttcgatagaaaacttttat
aaaacggactcggatgcggaagaagctattgcatctgtgtactttcagtggcggagtcag
gcatttaacgatttttttctgaaaaatacactctctgacgatatctactccggaggtggt
tcccggggcgataactctactctggaacaactgagtgaataccggttttcgacttcaaac
tcgaccatgtctgactattttagcggactttataccttgatttatcgatcaaacctggtg
atcaacaattttacggatgatacggaggcaaaacgccgggctattgccgaagcaaaagtg
gcgcgcggctgggcatatttgaatctggttactttatggggcccggttccttttgtcacc
agccaacttgcgccaagcgagtaccaacagccaaacggaacgctaagcgaaatttggggg
caaattgaaaccgacttgtcagaagctgccgcatccggggcgttgcccgaaaaagcaagt
gaagctgataaatctgtcggcggcagattgagcaaacaggcagctctttcatttttgggc
aaggcacaggtttttcaggggaaatacagcgaagcggccaccaccttaaaatcagttatc
aattccggcaaatacaaattgattgacaattacgaaaatgtgctccgcaaagtggaagat
tttggaccggaaaacattttcgaggtcaactcgataaacgatggtgaaaatgcttttaat
cagggaacaaccatattgggtaatatgtacggttggcgaagtgaccggctcaacctgaat
ggttactggtttggggcgcatgatttgtatcccggaggctggggctttgctaacccccgg
gaaaacttgtacaatgcttttgttgaaatggaaggaacagcaggttaccggctgaacgct
acggtaaaaacatatcagcaggtaatgacaattggcgctccggctgccccggttacggtg
aatgcaggaaccagtctttatggccacgaaggctatttcaactggaaatggcgttttctg
ggatccgaagttattcccaattcgtggggattggctactgataacaactaccggattatg
cgttatgccgaagtacttctgctggctgccgagtcatgcctgttatccggcgacggcgag
aatgcgctcaattatatcaaccaaattcgcaaccgcgcccaattgccggctttatcggcg
gttacgctagatgatattaaaaaggagaaacggttggaattatgcattgaacaggttcgg
tttcaggatttggtccgctggggcgatgccgctactgccctggcagagcagggaaagcaa
gtccctgttttcacaggcttgagagaagatgggacgcataatgtgagctacccttactca
aatacggcttatggttttaaggcaggaaaacatgagctgctgcctttcccggagcatgaa
atgaacgtgaactcaaacctgacacaaaataccggttggtag
DBGET
integrated database retrieval system
