Gaoshiqia hydrogeniformans: ACOIT5_11650
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Entry
ACOIT5_11650 CDS
T11085
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ghy Gaoshiqia hydrogeniformans
Pathway
ghy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACOIT5_11650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghy03021
]
ACOIT5_11650
Transcription machinery [BR:
ghy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACOIT5_11650
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
DUF8427
GerE
DUF4752
DUF4649
JmjN
Motif
Other DBs
NCBI-ProteinID:
XQW71070
LinkDB
All DBs
Position
complement(2916989..2917528)
Genome browser
AA seq
179 aa
AA seq
DB search
MDKTDDQLFQRVKQDDYLSFNLLFTRYYARLCVFVYEYIKDEAVAEDLIQDLFLKLWTER
KRIEIRDRVISYLYKASRNAALNYLRSETNKQKAINKLVLAASQTEDEFSDFDEFMAQVQ
VCIDELPDRSKQVFVMSRIDGMKHTEISEGLGISVKTIKNQIWKSMQYLRSCLQQKNVM
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaacagatgatcaattattccagcgtgtcaagcaagatgattatttaagtttt
aatctgctgtttacgcggtattatgcccgtctgtgtgtttttgtgtacgaatacatcaag
gatgaagcggttgccgaagatctgattcaagatctttttctgaaactgtggaccgaacgc
aaacggattgaaatccgcgatcgggtaatctcttacctgtataaagcatcgcggaatgct
gccctgaattatctccggtctgaaacaaataaacagaaagcaattaacaaactggtattg
gctgcaagccagacggaagatgaattttccgattttgacgaatttatggctcaggtacag
gtatgtattgatgaattgcccgacaggagcaaacaagtttttgtaatgagccggattgat
ggcatgaagcataccgaaatttcggaaggattgggaatatccgtaaaaaccattaaaaac
caaatttggaaatcgatgcaatatttgcgttcctgcctccaacagaaaaatgtcatgtag
DBGET
integrated database retrieval system
