Gaoshiqia hydrogeniformans: ACOIT5_13040
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Entry
ACOIT5_13040 CDS
T11085
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ghy Gaoshiqia hydrogeniformans
Pathway
ghy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ACOIT5_13040 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghy03400
]
ACOIT5_13040 (xseB)
Enzymes [BR:
ghy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
ACOIT5_13040 (xseB)
DNA repair and recombination proteins [BR:
ghy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ACOIT5_13040 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
FIVAR
CCDC113_CCDC96_CC
ZapB
CdvA
Cpf1_PI-like
Snapin_Pallidin
HMMR_N
Motif
Other DBs
NCBI-ProteinID:
XQW71338
LinkDB
All DBs
Position
3205059..3205259
Genome browser
AA seq
66 aa
AA seq
DB search
MVQKKMTYKEAVDEIDEILEKIENEELDVDELSEKVKRVSFLIKFCKEKLHKTETEVENI
LKEMDE
NT seq
201 nt
NT seq
+upstream
nt +downstream
nt
atggttcagaagaaaatgacttacaaggaagcggtggatgaaattgatgaaatcctggag
aaaattgaaaacgaagaactggatgtagacgaactgtcggaaaaggtgaaacgggtttcg
ttcctgattaaattttgcaaggaaaaactccataaaaccgaaaccgaggttgaaaacatt
ctgaaagaaatggatgagtag
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