Gaoshiqia hydrogeniformans: ACOIT5_14325
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Entry
ACOIT5_14325 CDS
T11085
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ghy Gaoshiqia hydrogeniformans
Pathway
ghy02024
Quorum sensing
ghy03060
Protein export
ghy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ACOIT5_14325 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ACOIT5_14325 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACOIT5_14325 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ghy02044
]
ACOIT5_14325 (ffh)
Enzymes [BR:
ghy01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ACOIT5_14325 (ffh)
Secretion system [BR:
ghy02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ACOIT5_14325 (ffh)
Eukaryotic Sec-SRP protein
ACOIT5_14325 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
SRPRB
AAA_17
AAA_22
cobW
AAA_18
MMR_HSR1
APS_kinase
nSTAND3
CbiA
6PF2K
ResIII
KAP_NTPase
AAA_30
AAA_33
AAA_16
ATPase
ATP_bind_1
AAA_14
DO-GTPase1
ATPase_2
KTI12
Thymidylate_kin
AAA_24
GTP_EFTU
TsaE
NACHT
NPHP3_N
FtsK_SpoIIIE
AAA
Motif
Other DBs
NCBI-ProteinID:
XQW71590
LinkDB
All DBs
Position
3558874..3560202
Genome browser
AA seq
442 aa
AA seq
DB search
MFENLNEKLERSFKLLKGEGRITEINVAETLKEVRRALLDADVNYKIAKSFTEVVKEKAL
GQNVLNALKPGQMMVKIVHDELASLMGGTFTDINLKGNPAIILIAGLQGSGKTTFSGKLA
KYLKTKKTKNPLLVAGDVYRPAAIDQLKVLGEQIGVPVYTEEGNKEPVKIAQAAIKYAKE
KGHNLVIIDTAGRLAIDEQMMNEIAAVKKAVTPDEILFVVDSMTGQDAVNTAKEFNDRLD
FDGVVLTKLDGDTRGGAALSIRSIVNKPIKFVGTGEKLDALDVFHPERMADRILGMGDIV
SLVERAQEQFDADQARQLQKKLAKNQFNFDDFLSQIQQIKKMGNLKDLASMIPGMGKALK
NIDIDDDAFKHIEAIIFSMTPAERNDPAVLNGSRRKRIAEGSGTNIQEVNRLIKQFDETR
KMMRMVSQGKNLGRMMGNMQRK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatcttaatgagaagttagagagatcgtttaaattgctgaaaggcgagggg
cgaatcaccgaaatcaatgttgccgaaacattaaaagaagtcaggcgggccttgctcgat
gctgacgttaattataaaattgccaaatcatttaccgaagttgtcaaagaaaaggccctg
gggcagaatgtgctgaacgccctgaaaccgggccagatgatggtgaagattgttcatgac
gaactggcttccctgatgggcggaacatttaccgacatcaacctgaagggaaacccggct
attattctgatcgcgggtttacaaggatccggtaaaacaaccttctccgggaaactggcc
aaatacctgaaaacaaaaaaaacgaaaaatccgctgttggttgccggcgacgtgtatcgt
cccgcagcgatcgaccagttgaaagtgcttggcgaacaaatcggtgtgccggtttatacc
gaagaagggaataaagagccggtaaaaattgcacaggcagcgatcaaatatgccaaagaa
aagggccataatctggtcattatcgataccgccggccgtttggccattgatgagcagatg
atgaacgaaattgcggccgtgaaaaaggccgttacccccgatgagattctgtttgttgtc
gattcgatgaccggtcaggatgcggtgaatacggccaaagaatttaacgatcgtctcgat
ttcgatggtgttgtgcttaccaagctcgacggggatacccgtggcggggctgcattgtct
atccgctccatcgtcaacaagccgattaaatttgtcggtaccggcgaaaagcttgatgcg
ctggatgtatttcaccccgaacgtatggccgaccgtattctcgggatgggcgatatcgtt
tcgttggtagaacgggcccaggaacaatttgatgccgaccaggcccgtcagttacaaaaa
aaactggccaagaaccaatttaattttgatgatttcctgtctcaaattcagcaaatcaaa
aaaatgggaaacctgaaagatctggcatccatgatccctggaatgggaaaagccttgaaa
aatatcgacattgacgacgacgctttcaaacacatcgaagcaatcatcttttcgatgacc
cccgctgaacgcaatgatcctgcagttttgaacggttcgcgcagaaaacgaattgccgaa
gggtcgggaaccaatattcaggaagtaaaccggctgatcaaacaatttgatgaaacccgg
aaaatgatgcgcatggtttcgcagggaaagaacctggggcggatgatgggaaatatgcaa
cgaaaataa
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