Gaoshiqia hydrogeniformans: ACOIT5_15910
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Entry
ACOIT5_15910 CDS
T11085
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ghy Gaoshiqia hydrogeniformans
Pathway
ghy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACOIT5_15910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghy03021
]
ACOIT5_15910
Transcription machinery [BR:
ghy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACOIT5_15910
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
GerE
PDDEXK_1
Sigma70_r4
HTH_23
HTH_24
HTH_11
HTH_40
HTH_28
HTH_38
Motif
Other DBs
NCBI-ProteinID:
XQW71893
LinkDB
All DBs
Position
complement(4013365..4014024)
Genome browser
AA seq
219 aa
AA seq
DB search
MEEDLKISDFQLASSVKRDDHAAFDRLFHRYGPSLFSFVAGILKDEYEAEEAVQEVFLKL
WEKRKELDTGLSLKAYLFTIAVNMARKYYRKKLQEEKYKQELALELKFSSSSDVSTADFK
NLLGHIDRIIELLPPARREIFILSRKQGLKNPEIAAKLNLSEQTVKNQLAAAQKFLRAEA
SKHDLWPGGLYLLTFFFTGHSTFSFLADITVKQDEENEI
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
ttggaagaagatttaaaaatatcagattttcaacttgcttcatcggtgaaaagagatgat
catgcggcatttgaccggttgtttcatcgatacgggccgtcgctgttttcgtttgtcgcg
ggcatacttaaagatgaatatgaagcggaagaagcagtgcaggaagtctttttaaagtta
tgggaaaaaagaaaagaactggataccggcctgtcgcttaaagcctacctgtttaccatt
gccgtaaacatggcccgcaaatattaccgcaaaaagctgcaggaagaaaagtacaaacag
gagctggcgctggaattaaagtttagcagcagttcggatgtcagcacggccgattttaag
aacctgctcgggcatatcgaccggatcattgagttgcttccgccggcccggcgcgaaatt
tttattttaagcaggaagcagggcttaaagaacccggaaattgcagcgaaattaaacctg
tctgaacaaactgtaaaaaaccagttggcggctgcccaaaaattcttacgcgccgaggca
tcgaaacacgatctgtggcccggcggattatacctgttgacattttttttcaccggacat
agtacgttttcttttcttgcggatataacagtaaagcaagacgaagaaaatgaaatttga
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