Gaoshiqia hydrogeniformans: ACOIT5_17420
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Entry
ACOIT5_17420 CDS
T11085
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ghy Gaoshiqia hydrogeniformans
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghy03009
]
ACOIT5_17420 (rimO)
Enzymes [BR:
ghy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ACOIT5_17420 (rimO)
Ribosome biogenesis [BR:
ghy03009
]
Prokaryotic type
ribosomal protein modification factors
ACOIT5_17420 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
XQW72190
LinkDB
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Position
4377083..4378384
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AA seq
433 aa
AA seq
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MKRGKVNIMTLGCSKNLVDSEMLLNQLDLNGFKVVHDSDQDDANIVILNTCGFIADAKEE
SINTILNFADARKSGKLDKLLVMGCLSARYKEDLTSEIPEVDKFYGKFDFKEIIKDLNAN
FYEQKIYHRVKTTPDHFSYLKISEGCNRHCSFCAIPQFTGNHKSRSMESLLEEAKDLVDS
GVKELLIIAQDLSYYGIDRYGESKLAELIDKLADVEGLEWIRLHYAYPSKFPADVLDVMR
KRDNVCKYLDIPLQHISDRMLGMMRRKITKEETISLIKKIRKEVPGIALRTTFLVGHPGE
TEDDFEELKSFIREYPFERMGVFAYSSEDDTYAFKMYKDDVPQEVKEARAAELMDMQQEI
SATLSQRQIGKTLKVLVDREEDDYFIGRTEFDSPEVDGEVLIDKSDHIQIGKFYPVRIDD
SSEFDLFGKLMPV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggaaaagtcaatatcatgaccctgggttgttccaaaaacctggttgattcg
gagatgttgctgaaccagttggatttaaatggttttaaagtggttcacgacagcgatcag
gatgacgccaatattgtcatactgaatacctgtggttttattgccgatgccaaagaagaa
tcaatcaatacgatcctgaactttgcagacgcccggaaatcgggaaaactcgataaactt
ttggttatgggatgtttgtcggcccggtataaagaagatctgaccagtgaaataccggaa
gtggataagttttacggcaagttcgattttaaggaaataatcaaagatttaaatgctaat
ttttacgaacagaaaatataccaccgggtaaagactacgcccgatcatttctcatatctg
aaaatcagcgaaggctgtaataggcattgttcgttttgtgccattccccagttcaccgga
aaccacaagtcccgcagcatggaaagtctgctggaagaagccaaagatctggttgatagc
ggtgtaaaagaactgctgatcatcgctcaggatctttcgtattacggaattgaccgctac
ggagaaagtaaactggccgagttgattgataaactggccgatgttgaagggctggagtgg
attcgcctgcattatgcctatccttcaaaattcccggcagatgtacttgacgtgatgcgt
aaacgcgataatgtttgcaaatacctggatattcccttgcaacacatcagtgacaggatg
ttgggtatgatgcgccgtaagattacgaaagaagaaaccatcagcctgataaagaaaatt
agaaaagaggttcccggaattgctttgcgtacaactttcctggtggggcatccgggtgaa
accgaagacgattttgaagagctgaagtcctttatccgggaatatccgtttgaacggatg
ggggtgtttgcttactcgagtgaagatgacacctacgcatttaaaatgtacaaagatgat
gttccacaggaagtgaaagaagcccgcgccgccgagttaatggatatgcagcaggaaatt
tcggccaccctgagtcagcggcagataggtaaaacactgaaagttttggttgacagggaa
gaagatgactattttattggccggacggaatttgattctcctgaagtagatggcgaggtt
ttgattgataaatcggatcatattcaaatcggcaagttttacccggttcggattgacgat
tcctcggagtttgatttgtttggaaaactaatgccggtatag
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