Gaoshiqia hydrogeniformans: ACOIT5_18460
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Entry
ACOIT5_18460 CDS
T11085
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ghy Gaoshiqia hydrogeniformans
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghy03032
]
ACOIT5_18460 (gyrA)
03400 DNA repair and recombination proteins [BR:
ghy03400
]
ACOIT5_18460 (gyrA)
Enzymes [BR:
ghy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ACOIT5_18460 (gyrA)
DNA replication proteins [BR:
ghy03032
]
Prokaryotic type
DNA Topoisomerases
ACOIT5_18460 (gyrA)
DNA repair and recombination proteins [BR:
ghy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ACOIT5_18460 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TarS_linker
BORCS7
bPH_6
Motif
Other DBs
NCBI-ProteinID:
XQW72394
LinkDB
All DBs
Position
4636102..4638597
Genome browser
AA seq
831 aa
AA seq
DB search
MADEERIIKINIEEQMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLFGMNELGILSNR
PYKKSARIVGEVLGKYHPHGDSSVYMTMVRMAQNWSLRYTLIDGQGNFGSIDGDSPAAMR
YTEARMSKIAEETLSDLDKNTVDFQPNFDESLSEPTVLPTRIPNLLINGASGIAVGMATN
MPPHNLPDTIDAITAYIDNKQIEIKDLIPIIKAPDFPTGGIIYGYKGVEESYETGRGRIV
IRGKSHIETHGHGRERIIITEIPYMVNKAELIMRIAELVNEKKIEGISNINDESDREGMR
IVVDIKKDEISNVVLNKLYKYTQLQTSFSVNNIALVKGRPRLLNLKDLIRYFVDHRHEVV
VRRTQYELEQAEKRAHILEGLIIASDNIDEVIAIIRSSKTPDEARERLMERFALSEIQSR
AIVEMRLRQLTGLEQDKLHQEYEEIQKFIEKCKEILANEDLRMQIIKDELAELKKQYSDG
RKTEIVPNAEEFNPEDFYADEEMVITISHLGYIKRTPLVDFRTQGRGGVGSKGSTTRDED
FLEHMFVASMHNTLLLFTEKGKCFWLKVYEIPEGTKTSKGRAIQNLLNIEQDDKVLAYIN
VKRLDDRDYINNNFIILCTKQGIIKKTSLEAYSRPRQNGINAITIREGDQLLEALLTNGN
HEIMLAVKTGKAIRFHESAVRAIGRTASGVRGITLGNDQDEVVGMISVENESEDVLVVSE
KGFGKRSSIEDYRITNRGGKGVKTINITEKTGSLIAINSVADNNDLMIITANGLTIRLPI
SDLRVMGRATQGVRLINLKGDNSIASVARVESDDDRKNEETDQDFDQPENE
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaagaaagaattataaaaatcaatattgaggaacagatgaaatccgcttac
atcgattattcgatgtcggtgattgtttcgcgagccttacccgatgtccgggacggcctg
aaacctgtacaccgccgggttttgtttgggatgaatgagcttgggatattatcaaacaga
ccatataaaaaatctgcaagaatagtgggggaggtactcggtaagtatcacccgcatggc
gactcatcggtctacatgacgatggtacgcatggcacagaattggtcgcttcgttataca
ttaatcgacggccaggggaactttggatcaattgacggtgacagtccggcagcaatgcgt
tacacggaagccagaatgtcaaaaatagccgaagaaacactgagcgacctcgacaaaaat
acggtcgattttcaaccaaactttgacgagtctctgagtgaaccgactgttttaccaacc
cgaatacccaacttgctgattaacggcgcttcgggtattgctgttggtatggcaaccaat
atgcctccgcataacctgcctgatacgattgatgccattacggcctatattgataataaa
cagattgaaatcaaggacttaataccaatcatcaaagctcctgattttcctaccggcggt
attatttacggctacaaaggggtagaagaatcctacgagaccgggcgcggacgaattgta
atcaggggaaaatcccatattgaaacccacggacacggccgcgaacggattattattacc
gaaattccctacatggtcaataaggccgagttgattatgagaatcgcggaactggtcaat
gaaaagaagattgagggaatctcgaatatcaacgacgaatctgaccgcgaggggatgcgg
atcgttgtggatattaaaaaagacgagatatcgaatgtcgttctgaataagttatacaaa
tacactcaactccagacgtccttcagtgtaaataatattgccttggtaaagggacgtccg
aggttgttaaacctgaaagacctgatccgctattttgtggaccatcggcatgaagtggtg
gtacgacgcacccaatatgagctggaacaggccgaaaagcgcgctcatattctggaaggt
ctgattattgccagcgacaatattgatgaagttattgccatcatccgcagttcaaaaacg
cctgatgaagccagagaacggttaatggaacgttttgcgctgtctgaaattcagtcgcgc
gccattgttgaaatgcgactccggcagttaaccggactggaacaggacaaactgcaccag
gaatatgaggaaatacagaaattcattgaaaaatgtaaagaaattctggccaacgaagat
ctgcggatgcaaatcatcaaagacgaacttgcggagttgaaaaaacaatattctgacggt
cgtaaaaccgaaattgtcccgaatgcagaagaattcaacccggaagatttttatgcggac
gaagaaatggtgatcaccatttcacatctgggttacatcaaacggacaccgctcgttgat
ttcaggacccagggaaggggaggagtcggctctaaaggcagcacgacacgtgatgaagat
tttctggagcatatgtttgttgcatcgatgcacaacaccttgttgttgtttaccgaaaaa
ggcaaatgtttctggctgaaagtttacgaaattccggaaggcacaaaaacatcaaaaggg
cgggccattcaaaacctgctgaatattgaacaggacgataaagtgctggcatatattaat
gtaaagcggctggacgaccgggattatatcaacaataacttcatcattctttgtacaaag
caagggatcattaagaaaacctcgctcgaagcttactcacgtccgcgacaaaatggcatt
aatgccattaccatcagggaaggagaccaattgctcgaagcgttattaaccaatggtaat
cacgaaatcatgctggccgtgaaaaccggtaaggcaattcgttttcacgagagcgctgtt
cgggcaatcggaagaactgcctcaggagttagggggattaccctcggaaatgatcaggat
gaagtcgttggcatgatatctgttgaaaacgaatcggaagacgtgctcgtggtatcagaa
aaagggttcggaaagcggtcgagcattgaagactaccggattaccaaccggggaggaaaa
ggcgtaaaaacgatcaatataacagaaaaaaccggtagcctgattgcgataaacagcgta
gccgacaacaacgatctgatgattatcacggctaacggattaaccatacgtttaccgatt
tctgatttgcgggttatgggacgggccactcagggagtcaggctgattaatctgaaagga
gacaattcaattgcctcggttgctcgtgtcgaatcggatgacgaccggaaaaatgaagaa
acagatcaggattttgatcaacctgaaaatgaataa
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