Gaoshiqia hydrogeniformans: ACOIT5_21630
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Entry
ACOIT5_21630 CDS
T11085
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ghy Gaoshiqia hydrogeniformans
Pathway
ghy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACOIT5_21630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghy03021
]
ACOIT5_21630
Transcription machinery [BR:
ghy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACOIT5_21630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_11
HTH_40
HTH_24
GerE
Zuotin_N
HTH_Mga
HTH_23
HTH_10
HTH_38
PhyR_sigma2
Motif
Other DBs
NCBI-ProteinID:
XQW73016
LinkDB
All DBs
Position
5423288..5423860
Genome browser
AA seq
190 aa
AA seq
DB search
MPAANDEILLIRDFKKGNAKAFERLFEIYHKRLYGFILKLTGSKADSEEIVQDTFIKIWI
NRTNFNESYRFDAYLFRIAKNSFISHTRRQINKRIFEDHLYLFADQADESADEQIIFKET
GLIVDILINSMPPKRKEIFCLQKKEGLSRKEISQRLNVSLVTIDSHLMKANKQFTEGLKK
YGLLAIVLFL
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
ttgccagccgcaaatgatgagatattattgatccgtgattttaaaaaaggaaatgcaaag
gcatttgaacggctttttgaaatctaccataaacgtctctatggattcattctaaaacta
accggttcgaaagccgacagtgaagagattgtccaggatacatttataaagatttggata
aaccgaaccaattttaatgaaagctaccgctttgacgcgtatttattcagaattgccaaa
aacagttttatcagtcatacgcgccggcaaatcaacaaacggatttttgaggaccatctg
tacctttttgctgatcaggctgacgagagcgccgacgaacaaatcatttttaaagaaacc
ggtctgattgtagacatcctgattaattcaatgcccccaaagcgaaaagagattttttgt
cttcaaaaaaaggaaggattgtcgagaaaagaaatcagtcagcggttaaatgtatcgctg
gtcaccatcgacagccacctgatgaaagccaacaaacaattcacggaaggcttgaaaaaa
tacggactattagcaatcgttttatttctttga
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