Gaoshiqia hydrogeniformans: ACOIT5_21840
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Entry
ACOIT5_21840 CDS
T11085
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
ghy Gaoshiqia hydrogeniformans
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghy02000
]
ACOIT5_21840
Transporters [BR:
ghy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
ACOIT5_21840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
XQW73058
LinkDB
All DBs
Position
complement(5492977..5494794)
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AA seq
605 aa
AA seq
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MKQINYIMSIAFAAIALNFSSCSLDEYNPSGATADVIFSTQEGLNMLVNSAYVNLESQFY
GREDMVLFLVGGNDLFINIGNGTYGRQMSKYQETTPAVGQFYNDFNRFYEGINYCNAGLE
RIGGIEFNSQVEKDAREGELRFLRAYYYWHLVEIYGNCDLRKTETKTFEQYAYRSPYSDF
YDLIISDLQIACQKLPVDPLPATDVGRATKKAAYGLLARTALTRASGYYSAMYNDAATYY
TIARDAAEYVINNQAALKTGLYSTPDQIFDYRNNKTNKEALFVVTHARTSGLNPRESNPN
RLHQYFKAAYSSAYSDGNNLMVKDLAYGDDKRARPGDMSMMPTKYLLNLYNDEIDARYRA
FFRDVYYCNSPNGYTWQAGSTDFINYEKNASVAGTRIAPGDTAIFYSKHPIADKATRPYA
CFDINDTYDPVTGRITTHAFKQVRFPALKKYDDPTRGSVNPDGSGGIPTSDRGTLDVIMI
RLAEMYLAAAEAHIGLNNPGGAVPHINALRARAAVPGKETQMSVSQSQMTFDFVLDERAR
ELCGEHLRWMDIKRTGKPADYIRERNLDIWQYLQSSPQMALLRPIPERFLLQILNAEEFG
QNPGY
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagatcaattatataatgtctattgcttttgctgcaatagctttaaatttctct
tcatgtagtttggacgagtataatccttccggggcaactgccgatgttatattctcgact
caggaaggactcaacatgttggttaattcggcttatgtgaacctggaaagccagttctac
ggacgcgaggatatggtgttgttccttgttggaggtaacgacttgtttattaatatcgga
aacggaacctatgggcgccagatgtcaaaataccaggaaacaactccggcagtaggccag
ttttacaacgacttcaaccgtttttacgaggggataaattactgcaatgccggattggaa
cgcataggaggcattgaatttaattcgcaggtagaaaaagatgcccgtgaaggcgaactc
cgcttcctgcgcgcttactattactggcacttagtcgagatttacggtaactgtgattta
cgtaaaacggaaaccaaaacatttgaacagtatgcctaccgaagtccgtatagcgatttt
tacgatctgattataagtgatttgcagattgcatgtcagaagcttccggttgatccgctc
ccggcaaccgacgttggccgcgcaacaaaaaaagcggcttacggactattggcacgtaca
gctcttacacgcgcttctggctactacagcgccatgtataacgatgccgctacctactat
accattgcccgagatgctgccgagtatgtaattaacaatcaggctgctctgaaaaccggt
ttatacagtacccccgatcaaattttcgattaccggaacaataaaacaaataaagaggcg
ctgtttgtcgtgacacatgcccgcacctctggccttaacccgagggagagcaacccgaat
cgtttgcaccaatactttaaagctgcttactcgtcagcttattcggatggcaataatctg
atggtgaaggacctggcctatggtgacgataaacgtgcccgtccgggcgacatgtcgatg
atgccgaccaagtacctgctcaacctgtataatgatgaaattgacgcccgctaccgggcc
ttcttccgcgatgtttattattgcaacagtccgaacggctatacctggcaggccggttcc
accgattttataaactatgagaagaatgcttctgtggcaggtacgcgcattgctccgggc
gacacggcaatcttttactccaaacatccgattgctgataaggcaacccgcccgtatgcc
tgttttgatattaacgatacctatgatccggtgaccggccgaataaccactcacgcgttc
aaacaggttcgtttccctgctttgaaaaaatatgatgatccgacccgtggctcggtcaat
cctgacggttcaggtggaattcctacttcagaccggggaacccttgatgtcattatgatc
cgtttggccgaaatgtacctggctgcggctgaggctcatatcggattgaataaccccggg
ggggctgtacctcatattaatgcactaagggcccgggctgctgtgcctggtaaagaaacc
caaatgagcgtttcacaaagccagatgacattcgactttgttcttgacgaaagagcccgt
gaactgtgcggcgaacatctgcgctggatggatatcaaaagaacaggcaaaccagccgat
tatatccgggaacgcaacctggatatctggcaataccttcagtcttctcctcaaatggcg
ttgcttcgtccgattcccgaacgcttcctgcttcagatactgaacgccgaagaatttgga
caaaacccgggctattaa
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