Gaoshiqia hydrogeniformans: ACOIT5_22450
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Entry
ACOIT5_22450 CDS
T11085
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
ghy Gaoshiqia hydrogeniformans
Brite
KEGG Orthology (KO) [BR:
ghy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghy02000
]
ACOIT5_22450
Transporters [BR:
ghy02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
ACOIT5_22450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
DUF5016
Motif
Other DBs
NCBI-ProteinID:
XQW73173
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Position
complement(5647598..5649388)
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AA seq
596 aa
AA seq
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MKRIQYIYLGLMILLTGMISCDDNKFLQEDPSTFYTVENAFTTSSQIDQVVVSIYSHIRD
LWVNPSETGWIYVFRGKGTDMYDVPSIRRGNTFSDYSVINPDNGNFYDNFSTWYYVISRA
NIAIHAAELPALSWSSAGEKAYVLAQARFFRAFAYRNLGELFGGVPIVTEPVEFPLFNFE
RATRVATYQFAITEIEAILNDLPETTASGGRIVRGAAQHNLSELYLALGIQLQTEGKETE
AQAAFTQSVSYASQVIDGGIYSLMNARFGARASETDIPINIYKNGVSSASEKVGVLSLPA
NYYWDLFQEGSVNYQDGNKECIWAAQIDYAAYKAEDGKSKLNYSRAYGPVFRDGAKNHLT
GTLEEVGGRGIAQMITTMYSRDLIYANEWGDDMRNSDIVYRRSFIGNVPGSPYYLNPVPW
EVMYNGGADATTNTNNRSLCYPVSCKIATDKYTGLADGENRSNLFRDDYIIRLPETILLR
AEAKQRMGNKAGAAADINLLRQRAQCGYLVSAVDMDDNFDMILDERARELVYEECRWNTL
LRVGGTIAVERIRNYAYWPETQATLTFNYNLWPIPQAVIDTNKDVVLAQNPGWTNR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatacaatatatttatctggggcttatgatacttctcacaggcatgataagc
tgcgatgacaataaattcctgcaggaagatccgtctactttttatacggttgagaatgca
tttaccacttcctctcaaatcgatcaggtggtggtttctatatattcccacatccgcgat
ttatgggtaaatccttctgaaacagggtggatttatgttttcaggggaaaaggaaccgat
atgtacgacgtgccaagtatccggagaggaaatactttcagcgattatagtgttataaat
cccgacaacgggaatttctacgacaatttttcgacatggtactatgtaatttccagggcg
aatattgccattcatgcggctgaattacccgctttgtcgtggtcgtcggccggtgagaaa
gcatatgttttggcgcaagccagatttttcagggcttttgcttatcgtaacctgggcgag
ctttttggcggtgtccccatcgttacggaaccggtcgagtttccgttgttcaactttgaa
cgagctacacgagtggccacctaccagtttgccattaccgagatagaagcgatcctaaat
gacttgcccgaaacaacggccagtggcggacggattgttcgtggggcagctcagcataat
ttgtccgaattgtacctcgctttgggaattcagctccagaccgaaggcaaagaaacggag
gctcaggcggcctttacccaatcggttagttatgccagccaagtgattgatggtgggatt
tattcgctgatgaacgctcgttttggggcccgggcttccgaaactgacattcccatcaat
atctacaaaaatggtgtttcaagtgcaagtgaaaaagtaggagtactcagtttgccggcc
aactactattgggacttgtttcaggaaggaagtgtgaattatcaggatggaaacaaagaa
tgcatctgggctgctcagatcgattatgccgcgtataaagcagaagacgggaaatcaaag
ctaaattattcacgggcttatgggccggtttttcgcgacggagcgaagaaccacctcacg
ggaacgctcgaagaagttggcgggcgcgggatcgcccagatgattacaaccatgtattca
cgcgatctgatctatgcaaatgaatggggagatgatatgaggaattcagatattgtttac
cgaaggtcgttcatcgggaatgtacccggttctccctattatttaaacccggtaccctgg
gaagttatgtataatggcggcgcagatgcaacaaccaataccaataaccgtagtctttgc
tatccggtttcctgcaaaattgctaccgataaatataccggactggccgatggggagaac
aggagtaacctgttccgtgatgattatattatccgtcttcccgaaacgatcctgcttcgc
gcagaagcaaaacaacggatggggaacaaagccggagctgcagccgatatcaacttgctc
aggcaacgcgcccagtgcggttacctggtgtcggctgtcgacatggatgacaattttgac
atgattcttgatgaacgcgcaagggagcttgtttacgaagaatgccggtggaatacctta
ttgcgtgtgggcggaaccattgccgtggaacgtatacgcaattatgcctattggcccgaa
acgcaagctacgctgacattcaattacaacctttggccgattccgcaagcggtaatcgac
accaacaaagatgttgttctggcccaaaacccgggctggacaaaccggtag
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