Geobacillus icigianus: ACPVTF_07100
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Entry
ACPVTF_07100 CDS
T11292
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gic Geobacillus icigianus
Brite
KEGG Orthology (KO) [BR:
gic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gic03016
]
ACPVTF_07100 (truB)
Enzymes [BR:
gic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACPVTF_07100 (truB)
Transfer RNA biogenesis [BR:
gic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACPVTF_07100 (truB)
Prokaryotic type
ACPVTF_07100 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
XRN34336
LinkDB
All DBs
Position
1384529..1385440
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AA seq
303 aa
AA seq
DB search
MDGVLLLHKPKGMTSHDCVASVRRLLGVKKAGHTGTLDPNVSGVLPICLGKATRIAEFLT
GATKTYEGEVTLGAATTTEDADGDIISARPIERAIARAEIEAVLDSLTGEIEQTPPMYSA
VKVGGKKLYEYARAGLEVERPVRRVTIYELKLLDEREQFTGETVSFRFRVTCSKGTYVRT
LAVTIGERLGYPAHMSDLVRTASGPFRLEECVTLAELARRAADGTAASLIIPIERALFHL
PKYQINDKVAEKVKNGALLRLPAFFEQVDGPIVLVSPEREALALYVKHPTRPGLMKPLKV
FGS
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggacggggtattgctgctccataaaccgaaaggaatgacatcgcatgactgtgtggcg
agcgtgcgccgcctgctcggcgtcaaaaaagcggggcacaccggtacgttggatccgaac
gtgtccggcgtgctgcccatttgccttggcaaggcgacgcgcatcgctgaatttttaacc
ggcgcgacgaaaacgtacgaaggagaagtgacgcttggggccgcgacgacaacggaagac
gccgacggcgacatcatctccgcccgcccgatcgagcgggcgatcgcgcgcgcggagatc
gaagcggtgctggacagcttgactggcgaaatagagcaaacgccgccgatgtactccgcg
gtgaaagtgggcggcaaaaaactatatgaatacgcgcgcgccggcctcgaagtggagcgt
ccggtgcggcgcgtgacgatttatgagctgaagctgctcgatgagcgtgagcagttcacc
ggggaaacggtgtcgttccgctttcgcgtcacgtgcagcaaaggcacgtatgtccgtacg
cttgcggtgacgatcggcgagcggctcggctacccggcgcacatgtccgatctggtccgg
acggcctcggggccgttccggcttgaggagtgtgtgacgttggcggaacttgcccggcga
gcggctgacggaacggccgcttccctcatcattccgattgagcgagcgctctttcatttg
ccgaaatatcaaatcaatgataaagtagcagagaaagtaaagaacggggcgctgcttcgc
cttcccgcatttttcgagcaggttgatggaccgattgtgctcgtttcgcctgagcgggaa
gcgctggctctgtacgtcaagcacccgacgcgccccggcttgatgaagccgctcaaagtg
tttggttcatga
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