Geobacillus icigianus: ACPVTF_13125
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Entry
ACPVTF_13125 CDS
T11292
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
gic Geobacillus icigianus
Pathway
gic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACPVTF_13125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gic03400
]
ACPVTF_13125
Enzymes [BR:
gic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACPVTF_13125
DNA repair and recombination proteins [BR:
gic03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACPVTF_13125
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
UvrD-helicase
AAA_16
AAA_22
T2SSE
AAA_12
HTH_IclR
AAA_28
UvrD_C
NPHP3_N
TusA
NTPase_1
AAA
TsaE
DUF4926
AAA_23
Zeta_toxin
nSTAND3
AAA_29
KTI12
Motif
Other DBs
NCBI-ProteinID:
XRN32163
LinkDB
All DBs
Position
complement(2575226..2577583)
Genome browser
AA seq
785 aa
AA seq
DB search
MQEQQTLAIEGCTFIKGTCISVIFHNEETLYTVVRIRVEETNEAPVEEEVIVTGHFPRIS
EGDIYVFYGQFRHHPRFGRQYAASQFRKQLPNTKEGIIQYLSSGLFKGIGKKTAAAIAEA
LGEQAIAVILRDPAALERIPKLSKQKAKQLYETLRAHEGLEQTMITLAQLGFGPQLAMKI
YQAYGEEAIEIIQANPYQLVEDIEGIGFGRADELGRQLGISGSHPARLRAASLFVLEQVC
LQEGHVYMAEEELVGRIAELLDGRPSGAVDGQAIQRTLLMLSEEGKLVVEQGRCYLPSLY
FAEKGIVSNVKRLLRQTAAPFAESEFLLALGALEERLGMQYAPQQKEAIQRALSSPLFIL
TGGPGTGKTTVIKGIVELFAALNGLSLDPARYQQGEPFPVVLAAPTGRAAKRMSEATGLP
AATIHRLLGWNGVEGFSRDEHEPLAGKLLVIDEMSMVDTWLANQLFKAVPNGMQVVLVGD
EDQLPSVGPGQVLKDLLESGVVPSVRLTDVYRQAEGSSIIELAHEVKRGAVPPDLTAPKA
DRSFIRCRAGQVVDVVRQIADNARKKGFSVKDIQVLAPMYRGPAGIDRLNKALQELFNPP
SAGKRELAAGEVVYRVGDKVLQLVNQPEDNVFNGDIGEVVAIFYAKENTDKQDLLVVSFD
GVEVTYTRQELSQITHAYCCSVHKAQGSEFPIVILPVVKSYYRMLKRNLLYTAVTRSKQF
LILCGEEEAFRAGVAKQSDGVRRTALAEKLTAAMAPVVEVELPLEDANVGMENVTPYDFM
SDESS
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
ttgcaagagcagcaaacgctggccattgaggggtgcacctttattaaaggaacgtgcata
tccgtcattttccataacgaagaaacgctttacaccgttgtccgcattcgcgttgaggaa
acgaacgaagcgccggttgaagaggaagtgatcgtcaccggccatttcccgcggatcagc
gagggagacatttatgtgttttatggtcaattccgccatcatccgcgctttggccgccag
tatgcggcgagccagttccgcaaacagcttcccaacacgaaagaaggaatcattcagtat
ttatcaagcggcttgtttaaagggatcggcaaaaaaacggctgcggctatcgccgaagcg
ctcggcgagcaggcgattgccgtgattttgcgcgatccagcggcgctcgagcgcattccg
aaactgtccaaacaaaaggccaagcagctgtacgaaacgctccgcgcccacgaagggctt
gagcagacgatgatcacccttgctcagctcggcttcggcccccagctggccatgaaaatt
taccaagcgtacggcgaggaagcgatcgaaatcatccaagccaatccgtatcagctcgtc
gaagacattgaagggatcgggttcggtcgcgccgatgagcttgggcggcagctcggcatt
tccggaagccacccggctcggctgcgcgccgcttccttgtttgtcctcgagcaagtttgc
ctgcaggaagggcatgtgtacatggccgaggaagagctggtcggccgcattgctgaactg
ctggatggccggccgagcggggcggtcgacggacaagccattcaacggacgctgctgatg
ttgagtgaagaaggaaaactggtcgttgagcaaggccgttgttatctcccgtcgctttac
tttgccgaaaaaggcatcgtttccaacgtcaagcggctgctccggcaaacggcggcgccg
tttgcggaatcggagtttttgctggcgctcggggcgcttgaagagcggcttggcatgcag
tacgcgccccagcaaaaagaggcgattcagcgggcgctttcctccccgttgttcatttta
accggcggtccgggcacgggaaaaacaacggtcatcaaagggattgtcgagctgttcgcc
gctcttaacggcttatcgttagatccggcccgctaccaacaaggtgagccgttcccggtc
gtgctcgccgccccgaccggacgggcggccaagcggatgagcgaggcgaccggcctgccg
gcggcgacgattcatcggctgctcggttggaacggagtggaagggttcagccgcgatgaa
catgaaccgcttgccggcaagctgcttgtcatcgatgaaatgtcgatggtcgacacatgg
ctggctaatcagctgttcaaagcggtgccaaacggcatgcaagtcgtgctggtcggcgat
gaagaccagctgccatccgtcgggcccggccaagtgctgaaagatttgctcgagtccggt
gtcgttccttcggtgcggctgacagacgtgtaccgtcaggcggaaggatcgtcgatcatc
gagctcgctcatgaggtaaagcgcggcgccgtgccgcccgatttgaccgcgccaaaggcg
gatcgctcgttcattcgctgccgcgccggccaagtcgtggatgtcgtccggcaaatcgcg
gacaatgcgcgaaaaaaaggcttttcggtcaaagatattcaagtgctcgccccgatgtac
cgaggcccggccggcattgatcggctcaataaagcgcttcaagagctcttcaatccgcca
tccgccgggaagcgggaactggcggccggcgaggtggtgtaccgcgtcggcgacaaggtg
cttcagctcgtcaatcagccggaagacaacgtgtttaacggcgatatcggcgaagtcgtt
gccattttttacgcgaaagagaacaccgacaagcaagacttgctcgttgtctcgtttgac
ggcgtggaagtgacctacacccggcaagagctgtcgcaaatcacccatgcgtattgctgc
tctgtgcataaagcgcaaggaagcgaattccctatcgtcattttgcccgtcgtgaaaagc
tactatcggatgttgaagcggaacttgctgtatacggcggtgacgagaagcaaacaattt
ttgattttatgcggcgaagaggaagcgtttcgggccggcgtcgccaagcagagcgacggg
gtgcggcggacggcgctggcggaaaaactgacggcggcgatggcgccggttgtcgaagtc
gaactgccgcttgaggatgcgaacgtcggaatggaaaacgttacgccgtatgactttatg
agcgatgagtcaagctaa
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integrated database retrieval system
