KEGG   PATHWAY: gil03010
Entry
gil03010                    Pathway                                
Name
Ribosome - Gilvimarinus sp. DA14
Class
Genetic Information Processing; Translation
Pathway map
gil03010  Ribosome
gil03010

Other DBs
PDB: 1FFK 1J5E 4V4A 4YBB 4V6U 4V6X 4UG0 4V88 3A1Y
Organism
Gilvimarinus sp. DA14 [GN:gil]
Gene
NHM04_01500  rpsB; 30S ribosomal protein S2 [KO:K02967]
NHM04_01770  rpmF; 50S ribosomal protein L32 [KO:K02911]
NHM04_02840  rpsA; 30S ribosomal protein S1 [KO:K02945]
NHM04_04845  rplS; 50S ribosomal protein L19 [KO:K02884]
NHM04_04860  rpsP; 30S ribosomal protein S16 [KO:K02959]
NHM04_04925  rplT; 50S ribosomal protein L20 [KO:K02887]
NHM04_04930  rpmI; 50S ribosomal protein L35 [KO:K02916]
NHM04_05860  [KO:K02897]
NHM04_06935  rpsI; 30S ribosomal protein S9 [KO:K02996]
NHM04_06940  rplM; 50S ribosomal protein L13 [KO:K02871]
NHM04_07280  rrf; 5S ribosomal RNA [KO:K01985]
NHM04_07285  [KO:K01980]
NHM04_07300  [KO:K01977]
NHM04_07710  rpmE; 50S ribosomal protein L31 [KO:K02909]
NHM04_08370  rplI; 50S ribosomal protein L9 [KO:K02939]
NHM04_08380  rpsR; 30S ribosomal protein S18 [KO:K02963]
NHM04_08385  rpsF; 30S ribosomal protein S6 [KO:K02990]
NHM04_11315  rpmH; 50S ribosomal protein L34 [KO:K02914]
NHM04_12175  rpmB; 50S ribosomal protein L28 [KO:K02902]
NHM04_12180  rpmG; 50S ribosomal protein L33 [KO:K02913]
NHM04_12950  rpsO; 30S ribosomal protein S15 [KO:K02956]
NHM04_13080  [KO:K01977]
NHM04_13095  [KO:K01980]
NHM04_13100  rrf; 5S ribosomal RNA [KO:K01985]
NHM04_13235  rplK; 50S ribosomal protein L11 [KO:K02867]
NHM04_13240  rplA; 50S ribosomal protein L1 [KO:K02863]
NHM04_13245  rplJ; 50S ribosomal protein L10 [KO:K02864]
NHM04_13250  rplL; 50S ribosomal protein L7/L12 [KO:K02935]
NHM04_13265  rpsL; 30S ribosomal protein S12 [KO:K02950]
NHM04_13270  rpsG; 30S ribosomal protein S7 [KO:K02992]
NHM04_13550  rpsJ; 30S ribosomal protein S10 [KO:K02946]
NHM04_13555  rplC; 50S ribosomal protein L3 [KO:K02906]
NHM04_13560  rplD; 50S ribosomal protein L4 [KO:K02926]
NHM04_13565  rplW; 50S ribosomal protein L23 [KO:K02892]
NHM04_13570  rplB; 50S ribosomal protein L2 [KO:K02886]
NHM04_13575  rpsS; 30S ribosomal protein S19 [KO:K02965]
NHM04_13580  rplV; 50S ribosomal protein L22 [KO:K02890]
NHM04_13585  rpsC; 30S ribosomal protein S3 [KO:K02982]
NHM04_13590  rplP; 50S ribosomal protein L16 [KO:K02878]
NHM04_13595  rpmC; 50S ribosomal protein L29 [KO:K02904]
NHM04_13600  rpsQ; 30S ribosomal protein S17 [KO:K02961]
NHM04_13605  rplN; 50S ribosomal protein L14 [KO:K02874]
NHM04_13610  rplX; 50S ribosomal protein L24 [KO:K02895]
NHM04_13615  rplE; 50S ribosomal protein L5 [KO:K02931]
NHM04_13620  rpsN; 30S ribosomal protein S14 [KO:K02954]
NHM04_13625  rpsH; 30S ribosomal protein S8 [KO:K02994]
NHM04_13630  rplF; 50S ribosomal protein L6 [KO:K02933]
NHM04_13635  rplR; 50S ribosomal protein L18 [KO:K02881]
NHM04_13640  rpsE; 30S ribosomal protein S5 [KO:K02988]
NHM04_13645  rpmD; 50S ribosomal protein L30 [KO:K02907]
NHM04_13650  rplO; 50S ribosomal protein L15 [KO:K02876]
NHM04_13660  rpmJ; 50S ribosomal protein L36 [KO:K02919]
NHM04_13665  rpsM; 30S ribosomal protein S13 [KO:K02952]
NHM04_13670  rpsK; 30S ribosomal protein S11 [KO:K02948]
NHM04_13675  rpsD; 30S ribosomal protein S4 [KO:K02986]
NHM04_13685  rplQ; 50S ribosomal protein L17 [KO:K02879]
NHM04_15115  rpsU; 30S ribosomal protein S21 [KO:K02970]
NHM04_16150  rplU; 50S ribosomal protein L21 [KO:K02888]
NHM04_16155  rpmA; 50S ribosomal protein L27 [KO:K02899]
NHM04_16235  rpsT; 30S ribosomal protein S20 [KO:K02968]
Reference
  Authors
Ban N, Nissen P, Hansen J, Capel M, Moore PB, Steitz TA.
  Title
Placement of protein and RNA structures into a 5 A-resolution map of the 50S ribosomal subunit.
  Journal
Nature 400:841-847 (1999)
DOI:10.1038/23641
Reference
  Authors
Clemons WM Jr, May JL, Wimberly BT, McCutcheon JP, Capel MS, Ramakrishnan V.
  Title
Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.
  Journal
Nature 400:833-840 (1999)
DOI:10.1038/23631
Reference
  Authors
Cate JH, Yusupov MM, Yusupova GZ, Earnest TN, Noller HF.
  Title
X-ray crystal structures of 70S ribosome functional complexes.
  Journal
Science 285:2095-2104 (1999)
DOI:10.1126/science.285.5436.2095
Reference
  Authors
Ban N, Nissen P, Hansen J, Moore PB, Steitz TA.
  Title
The complete atomic structure of the large ribosomal subunit at 2.4 A resolution.
  Journal
Science 289:905-920 (2000)
DOI:10.1126/science.289.5481.905
Reference
  Authors
Nissen P, Hansen J, Ban N, Moore PB, Steitz TA.
  Title
The structural basis of ribosome activity in peptide bond synthesis.
  Journal
Science 289:920-930 (2000)
DOI:10.1126/science.289.5481.920
Reference
  Authors
Wimberly BT, Brodersen DE, Clemons WM Jr, Morgan-Warren RJ, Carter AP, Vonrhein C, Hartsch T, Ramakrishnan V.
  Title
Structure of the 30S ribosomal subunit.
  Journal
Nature 407:327-339 (2000)
DOI:10.1038/35030006
Reference
  Authors
Carter AP, Clemons WM, Brodersen DE, Morgan-Warren RJ, Wimberly BT, Ramakrishnan V.
  Title
Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.
  Journal
Nature 407:340-348 (2000)
DOI:10.1038/35030019
Reference
  Authors
Noeske J, Wasserman MR, Terry DS, Altman RB, Blanchard SC, Cate JH
  Title
High-resolution structure of the Escherichia coli ribosome.
  Journal
Nat Struct Mol Biol 22:336-41 (2015)
DOI:10.1038/nsmb.2994
Reference
  Authors
Armache JP, Anger AM, Marquez V, Franckenberg S, Frohlich T, Villa E, Berninghausen O, Thomm M, Arnold GJ, Beckmann R, Wilson DN
  Title
Promiscuous behaviour of archaeal ribosomal proteins: implications for eukaryotic ribosome evolution.
  Journal
Nucleic Acids Res 41:1284-93 (2013)
DOI:10.1093/nar/gks1259
Reference
  Authors
Anger AM, Armache JP, Berninghausen O, Habeck M, Subklewe M, Wilson DN, Beckmann R
  Title
Structures of the human and Drosophila 80S ribosome.
  Journal
Nature 497:80-5 (2013)
DOI:10.1038/nature12104
Reference
  Authors
Khatter H, Myasnikov AG, Natchiar SK, Klaholz BP
  Title
Structure of the human 80S ribosome.
  Journal
Nature 520:640-5 (2015)
DOI:10.1038/nature14427
Reference
  Authors
Naganuma T, Nomura N, Yao M, Mochizuki M, Uchiumi T, Tanaka I
  Title
Structural basis for translation factor recruitment to the eukaryotic/archaeal ribosomes.
  Journal
J Biol Chem 285:4747-56 (2010)
DOI:10.1074/jbc.M109.068098
KO pathway
ko03010   

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