KEGG   Gilvimarinus sp. DA14: NHM04_00675
Entry
NHM04_00675       CDS       T08272                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
gil  Gilvimarinus sp. DA14
Pathway
gil00010  Glycolysis / Gluconeogenesis
gil00020  Citrate cycle (TCA cycle)
gil00260  Glycine, serine and threonine metabolism
gil00280  Valine, leucine and isoleucine degradation
gil00310  Lysine degradation
gil00380  Tryptophan metabolism
gil00620  Pyruvate metabolism
gil00630  Glyoxylate and dicarboxylate metabolism
gil00640  Propanoate metabolism
gil00670  One carbon pool by folate
gil00785  Lipoic acid metabolism
gil01100  Metabolic pathways
gil01110  Biosynthesis of secondary metabolites
gil01120  Microbial metabolism in diverse environments
gil01200  Carbon metabolism
gil01210  2-Oxocarboxylic acid metabolism
gil01240  Biosynthesis of cofactors
Module
gil_M00009  Citrate cycle (TCA cycle, Krebs cycle)
gil_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gil_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
gil_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:gil00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    NHM04_00675 (lpdA)
   00020 Citrate cycle (TCA cycle)
    NHM04_00675 (lpdA)
   00620 Pyruvate metabolism
    NHM04_00675 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    NHM04_00675 (lpdA)
   00640 Propanoate metabolism
    NHM04_00675 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    NHM04_00675 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    NHM04_00675 (lpdA)
   00310 Lysine degradation
    NHM04_00675 (lpdA)
   00380 Tryptophan metabolism
    NHM04_00675 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    NHM04_00675 (lpdA)
   00670 One carbon pool by folate
    NHM04_00675 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gil04147]
    NHM04_00675 (lpdA)
Enzymes [BR:gil01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     NHM04_00675 (lpdA)
Exosome [BR:gil04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   NHM04_00675 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox GIDA FAD_binding_2 FAD_binding_3 Pyr_redox_3 HI0933_like 3HCDH_N FAD_oxidored NAD_binding_8 Thi4 AlaDh_PNT_C Lycopene_cycl RadD_C 2-Hacid_dh_C
Other DBs
NCBI-ProteinID: UTF60341
LinkDB
Position
163232..164686
AA seq 484 aa
MSDKYDVIVVGSGPAGYVGAIRCAQLGLKTACIEKWKDKDGKGINGGTCLNTGCIPSKAL
LDSSQKFHYAEEGFANHGISTGKLAIDVPAMIKRKEAVVKQMSGGVAGLFQSNKVKSLYG
TGKLLAGKKVEFTDNNGKTSILEADNVILASGSIPVNIGVAPVDNDVIVDSTGALEFQEV
PKRLGVIGAGVIGLELGSVWKRVGAEVVLLEAMDNFLSIMDQQIAKEAQKIFTKQGLDIR
LSCRVTGTEVKGRGKKKEVEVTYTDKDGNEQKEVFDKLIVCVGRKPYTEGLLAEDSGVNL
DERGFIYVNDLCSTDAPGVWAVGDVVRGPMLAHKGSEEGVMVAERIAGQKPLVNYDIIPN
VIYTHPEVASVGKTEEQLKAEGEDYEVGTFPFMAVGRAVASDEAEGMVKIIAHAKTDRIL
GAHIVGPSASDLVQQVAIAMEFGSSAEDIGMTVFGHPTFSEAVKEAALAVGGHAIHMPNR
KRKK
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgtctgacaaatacgatgtgattgtggttggttcgggccccgccggatacgtgggggcc
attcgctgcgctcaactgggcctgaaaaccgcctgtattgaaaagtggaaagacaaagac
ggtaaaggcatcaacggcggtacttgtctgaacacaggttgtattccatccaaagcgctg
cttgatagctcgcaaaaatttcattatgccgaggaaggttttgccaaccacggcatcagc
accggtaagctggccattgacgtgcccgccatgattaagcgtaaagaggcggtggttaaa
caaatgtctggcggcgttgccggcctgtttcagtccaacaaagttaaaagcctttacggt
accggcaagctgttggccggcaagaaagttgagttcaccgataataacggcaaaactagc
atattagaggctgacaatgtgatcctggcctctggttctatcccggttaatatcggtgtc
gcccccgtcgacaacgacgttattgttgattctactggcgcgttggaattccaggaagtg
ccaaagcgcttgggggttattggcgctggtgttattggtcttgagctgggtagtgtatgg
aagcgtgtgggcgcagaagtagtactgctggaagccatggacaacttcctgtcgattatg
gatcagcagatcgccaaagaagcgcagaaaatcttcaccaagcaaggcctggatattcgc
ctgagctgtcgtgttaccgggaccgaagtgaaaggccgcggtaagaagaaagaagttgaa
gtgacctacaccgacaaagatggcaacgagcaaaaagaagtgttcgataagctcatcgtt
tgtgtggggcgcaagccatacaccgaaggcctgctcgccgaggacagcggtgtaaatctc
gacgagcgcggctttatttacgttaatgatctttgctctaccgacgccccaggcgtatgg
gcggtaggtgatgtggtgcgcgggcccatgctggcccataaaggctcggaagagggcgtt
atggttgccgagcgtatcgccggtcagaagcctctggtcaattacgatatcattcccaac
gtgatctatactcaccccgaagtggcctctgtgggtaaaaccgaagagcagctcaaagcc
gaaggtgaagattacgaagtgggtacattcccctttatggcggtaggccgagcggtagct
tcggatgaagcagagggtatggttaaaattattgcacatgctaaaaccgatcgtattctc
ggtgcccacattgtcgggccgtcagcgtcagatctggtgcagcaagtggcaattgccatg
gagtttggctctagcgcagaggatatcggcatgactgtattcggtcacccgaccttctct
gaggcggtcaaagaagcggctctggccgtgggtggtcatgctattcacatgcctaaccgc
aagcgcaagaaataa

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