KEGG   Gilvimarinus sp. DA14: NHM04_00940
Entry
NHM04_00940       CDS       T08272                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
gil  Gilvimarinus sp. DA14
Pathway
gil00040  Pentose and glucuronate interconversions
gil01100  Metabolic pathways
gil02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:gil00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    NHM04_00940
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NHM04_00940
Enzymes [BR:gil01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     NHM04_00940
SSDB
Motif
Pfam: Pectate_lyase_4 DUF3558
Other DBs
NCBI-ProteinID: UTF60392
UniProt: A0A9J7A7T5
LinkDB
Position
complement(213196..214347)
AA seq 383 aa
MKAVSYSSLLVLSAFLAACGGSDDPTTGSDPTYPDNGSSSSSSSSTASSESSSSQASSSS
SSVANHCEQMNTVVGFASLGDGTTGGEGGSSVTVTTGVELAQALASKGADPLTILVDGTI
TPDNSNTDKFDVKNMSDVSIIGVGDNALLDGIGIKISDASNIIIRNLTIRFVDIGEKDGI
GLEGPANNIWIDHNEIYNTLDSDKDYYDELVSGKRDVDNVTISYNYLHDSWKTSLWGSSD
SDNAHRRITFYANYWENASSRMPLFRFGESHILNNYYKDVDSTAVNSRMGANIRVEGTVF
ENVQNPIVSFYSEEVGYWDLADNIYTNISWSNPSGGDIIAGPGTDLESTVSYTPEYEYSA
MPAAEVVEHVTTYAGSGKINDCL
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgaaagcagtatcctactccagcctgttggtactgagcgcgtttttggcggcctgtggt
ggctctgacgacccgactaccggcagcgacccaacctacccggataacggctcttccagc
tcctctagcagctcaaccgcaagcagcgagagctcgtcttcacaagcgtcttcttccagt
tcgtcagtggccaatcactgcgagcagatgaataccgtggtcggctttgccagtctgggc
gatggcaccacaggtggtgaaggcggcagcagcgtaaccgtcactaccggcgttgagttg
gcccaggcacttgccagcaaaggcgctgacccacttaccatcctggtggacggcacgatt
acaccggacaattccaacacggataaatttgacgttaaaaacatgtcggatgtatccatc
attggtgtcggagacaacgcactgctagacggtatcggcattaagatatccgatgctagc
aacatcattatccgcaacctgacaattcgtttcgtagacataggcgagaaggacggtatc
ggcctggaaggtcccgctaacaacatctggatcgaccacaacgaaatctacaacacgtta
gattccgacaaggactactacgatgagttggtcagcggtaaacgcgatgtggataacgtg
accatttcgtacaactacctgcacgatagctggaagacctcgctatggggcagcagcgat
agtgacaacgcccatcgtcgtattaccttctatgccaactactgggaaaacgccagctcg
cgtatgccgctattccggttcggcgagagccacatacttaacaactactacaaagatgtc
gactctacggcggtcaactcccgcatgggcgccaacatccgcgtagagggaacggtattt
gaaaatgtgcaaaaccctattgtcagcttctactctgaagaagtgggttactgggactta
gccgataatatttacaccaacattagctggagcaaccccagcggtggcgacattatcgcg
ggccccggcactgacctcgaatcgaccgtgagctatacccctgagtatgaatactcggcc
atgcccgccgccgaagtcgttgagcatgtaaccacttacgccggcagcggaaaaattaac
gattgtttgtaa

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