Gilvimarinus sp. DA14: NHM04_01860
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Entry
NHM04_01860 CDS
T08272
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
gil
Gilvimarinus sp. DA14
Pathway
gil00071
Fatty acid degradation
gil00280
Valine, leucine and isoleucine degradation
gil00310
Lysine degradation
gil00362
Benzoate degradation
gil00380
Tryptophan metabolism
gil00410
beta-Alanine metabolism
gil00640
Propanoate metabolism
gil00650
Butanoate metabolism
gil00907
Pinene, camphor and geraniol degradation
gil00930
Caprolactam degradation
gil01100
Metabolic pathways
gil01110
Biosynthesis of secondary metabolites
gil01120
Microbial metabolism in diverse environments
gil01200
Carbon metabolism
gil01212
Fatty acid metabolism
Module
gil_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NHM04_01860 (fadB)
00650 Butanoate metabolism
NHM04_01860 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
NHM04_01860 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NHM04_01860 (fadB)
00310 Lysine degradation
NHM04_01860 (fadB)
00380 Tryptophan metabolism
NHM04_01860 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NHM04_01860 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NHM04_01860 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NHM04_01860 (fadB)
00930 Caprolactam degradation
NHM04_01860 (fadB)
Enzymes [BR:
gil01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NHM04_01860 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NHM04_01860 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NHM04_01860 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
NHM04_01860 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DAO
Motif
Other DBs
NCBI-ProteinID:
UTF60565
UniProt:
A0A9J7A6A5
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All DBs
Position
446340..448469
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AA seq
709 aa
AA seq
DB search
MLQGKSIRLEAKGDCAHLIFAAQDSVNIFNKNAVQELTQALDLLEQEGFNALLIRSEQSD
FIFGADISEFLPLFEAGAAAVEEYLSVNIDNFNRLQALPFPTVALLNGLVLGGGMEMALA
CDFRVADSTARLGLPEVKLGIIPGWGGAVRLPRIVGADTAIEWICSGKQYRANEALTAGV
VDAVVAPESLLHAGGELLEQLIAGARDYQHRRKVKSAALGLNSIEAPLVFQSSIAFVAAK
AGKHYPAPLAAAKAIQKAAGMNASEAEQVELEAFLSVAVSETAASLIRIFLSDQALNKKA
KQWAAMSPKPCGKAAVIGAGIMGGGIAYQSALKGVPVVMKDIEQKGLELGLKEANKLILK
QLERGRLDAAQATAALTRIAPTLSYGDFINVDVSVEAVVENERVKQVVLSEAEQALSEEA
VLASNTSTISISRLAKALEKPERFCGMHFFNPVPAMPLVEVIRGERTSESTIAQVVSYAR
QLGKKPVVVNDCPGFLVNRVLFPYFGGFSLLVKDGVDYQRIDRVMEAFGWPMGPAYLLDV
VGLDTALHAEAVMAEGYPERMKRDYTSAMELLVQHKMLGQKSGSGFYVYDTDKKGKLVKT
VNPEAQQLLPTVEQLDISDEDILLRMMIPMVNELARCLDEQIVESAAEADMAMLYGTGFP
AHRGGVLHWLEGQGVDKFVADMQAYQHLGALYRPAEFLLNKARQGSGIY
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaaggtaaatcgattcgtctggaggctaaaggagactgtgctcatcttattttt
gctgcgcaggactcggtcaacatctttaacaaaaatgcggtacaagagctaacccaggcc
ctggatctgctagagcaggaaggttttaacgctctgttgattcgcagcgagcaaagcgat
tttatttttggtgccgatatcagtgaatttttgcctttgtttgaggctggcgccgcagcg
gtggaagagtacctgtcagttaatatcgataatttcaaccgtctgcaggctctgccattc
cctacagtggcgcttcttaacggtttggtgttagggggcggcatggagatggcgctagcg
tgcgactttcgcgttgccgacagcacggcaaggctcgggttgccggaagtaaaattaggc
attatccccggttgggggggggcggtgcgcttgccgcggattgtgggcgcagacacggcc
attgaatggatttgtagtggcaaacagtaccgcgccaacgaagcgttaacagccggagtg
gtcgatgctgtagtcgcccccgagtcgttgctgcacgctggtggcgagttgctcgagcag
cttattgctggtgcgcgtgattatcagcaccgacgcaaggttaaatctgcggctctcggg
ctcaattcgattgaggcgcccctcgtttttcaatccagtatcgcctttgtcgcggccaaa
gcaggaaaacattatccggcgccgctggcggcggcgaaggctatacaaaaggcggccgga
atgaacgcttctgaggctgagcaagtcgagctggaagcttttctgtctgtagctgttagc
gaaacagcagcttcgcttatcagaatctttttatctgaccaggcgctgaataaaaaagcc
aaacaatgggcagcgatgtctcccaagccctgcggcaaagcggccgttatcggcgcaggc
atcatgggtggtggcattgcctatcagtcggcactgaagggggtgccggtggtgatgaaa
gacattgagcagaagggcttagagttaggcttaaaggaagcgaataaattgatcctaaag
cagctcgagcgcggacgtctggatgccgcgcaggcgactgcagcgcttacaagaatcgcc
ccgacgcttagctacggcgattttataaatgtcgatgtgagcgtcgaagccgtggtggaa
aacgagcgggttaagcaagttgtattaagcgaagctgagcaggcgctgtcggaggaggca
gtattagcttctaatacctctacgatttccatcagtcggctggccaaagctttggaaaaa
cctgagcggttttgcggcatgcatttttttaaccctgtgcccgccatgcctttggttgaa
gtgattcgcggcgagcgaacctcggagagcactatcgcgcaggttgtaagctatgcccgt
cagctgggcaagaagccggtggtggtaaatgactgtcccggctttttggttaatcgcgtt
ttgttcccgtatttcggcggtttttcccttttagtgaaagatggggtggattatcagcgt
atcgatagggttatggaggctttcggttggcctatggggccggcctatttgcttgatgta
gtggggctagatacggcgctccatgcggaagctgtaatggcagaagggtatcccgagcgc
atgaagcgtgattacacttctgccatggagttgttggtgcaacataagatgttgggtcaa
aagtcaggctcaggcttttatgtttacgatactgataaaaaaggcaagctggtgaaaacc
gtcaatcctgaggcgcagcagttgcttccaaccgtcgagcagctagatatatccgacgaa
gatatccttctgagaatgatgatacccatggtaaacgagttagcccgttgccttgatgag
cagatagtggagtcggcagcagaggctgacatggcgatgctttacgggactggatttccc
gctcatcgaggcggtgtcttgcactggttagaaggccagggtgtagacaaattcgtcgcc
gatatgcaggcctatcaacatctgggcgcgctttatcgaccagccgagtttttgctgaac
aaagcccgtcagggttctggtatttattaa
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