Gilvimarinus sp. DA14: NHM04_01960
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Entry
NHM04_01960 CDS
T08272
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gil
Gilvimarinus sp. DA14
Pathway
gil03030
DNA replication
gil03430
Mismatch repair
gil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NHM04_01960 (dnaQ)
03430 Mismatch repair
NHM04_01960 (dnaQ)
03440 Homologous recombination
NHM04_01960 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gil03032
]
NHM04_01960 (dnaQ)
03400 DNA repair and recombination proteins [BR:
gil03400
]
NHM04_01960 (dnaQ)
Enzymes [BR:
gil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NHM04_01960 (dnaQ)
DNA replication proteins [BR:
gil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NHM04_01960 (dnaQ)
DNA repair and recombination proteins [BR:
gil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NHM04_01960 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UTF60584
LinkDB
All DBs
Position
471260..471991
Genome browser
AA seq
243 aa
AA seq
DB search
MSVSGKGHRQIVLDTETTGLDPASGHKIIEIGCVEVVNRKLTGNHYHQYINPQREVDAGA
IEVHGITNEMLADKPVFSQIRDEFLAFIEGGELVIHNAPFDVGFIDHELRALNPSHQTIA
LTNSIVDSLVLARGKHPGQKNNLDALCKRYGVDNSQRDLHGALLDAEILADVYLLMTGGQ
TALSLGSSGSSSDEGGSGSGEIRRLSADRTPLPIIQASGEELERHQEKLAEIDKASGGNC
LWR
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtgagtggaaaagggcaccggcaaatagtgctggatacagaaaccacggggctt
gacccagcttcgggacacaagattatcgaaattggctgcgtcgaggtggtcaatcgcaag
cttacgggtaaccactaccatcagtatataaatccgcagcgcgaggtagacgcgggagcg
attgaggtgcacgggattaccaacgaaatgttggcagataaaccggtattttcacagatt
cgcgacgaatttctggcctttattgaaggtggagagctggttattcacaatgcccccttc
gatgtcggttttatcgatcatgagcttcgcgcactgaatccatcccatcaaaccatcgcg
ctaaccaactcgattgtcgactctctggtgctggccagaggcaagcatccgggacagaaa
aataatctcgatgcgctgtgcaagcgatacggcgtagataactcgcagcgagacttgcac
ggcgccttgcttgatgccgagattttggcagatgtttatctgctgatgacaggcggacag
acagctctatcgttgggaagtagcggcagcagtagtgacgagggcggctccggcagtggc
gaaattcgtcgcctcagcgcggataggacgcctttgcctattattcaggcgagcggcgaa
gagctcgagcgccaccaagaaaaactggctgagatcgacaaggccagtggaggcaactgc
ctttggcggtaa
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