Gilvimarinus sp. DA14: NHM04_02320
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Entry
NHM04_02320 CDS
T08272
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gil
Gilvimarinus sp. DA14
Pathway
gil03030
DNA replication
gil03430
Mismatch repair
gil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NHM04_02320
03430 Mismatch repair
NHM04_02320
03440 Homologous recombination
NHM04_02320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gil03032
]
NHM04_02320
03400 DNA repair and recombination proteins [BR:
gil03400
]
NHM04_02320
Enzymes [BR:
gil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NHM04_02320
DNA replication proteins [BR:
gil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NHM04_02320
DNA repair and recombination proteins [BR:
gil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NHM04_02320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
RNase_H_2
DUF7508
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
UTF60655
LinkDB
All DBs
Position
562528..563958
Genome browser
AA seq
476 aa
AA seq
DB search
MTDTLKQSFFPGLNGPLAIVDIETTGGNVTRDRITEIGIVTVDDKGVHEWSTLINPGMAI
PKTVQALTGIDNEMVADAPRFEQVAKQIWLRLEGKVFIAHNVRFDYGFIRNAFADLGFPV
QLNLLCTVKLSRALYPEFKRHGLEAIIQRFDIPTSARHRALADARATYHFLTIAQQEKTA
AAFMTAVQGQTRRPSLPPGLEPGVIERLPNTPGVYYFYGDNDNLLYIGKSINVRKRVMSH
FSADKASAKAMAMCQQIRDIQAEPTTGELSALLLESAEIKKHQPIFNRRLRRLSKLYTLQ
LQEDDAGLLRPHILPVGEAQRQLKMYGLFPSQKKARNALLEAAKPAGLCDHVVLTDTPAV
VACMGWQLNRCRGLCTGSISTVQHNVWMMESLAKLALQAWPYPGPVCLLEHAQNGEQYTA
FLIDNWCLLASQSGIGEPDMDDLRASAAEPALDRDLYRYLSKAILKGAQQTQLIPL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtgacagatacgctcaagcaatcgtttttccccggtttgaatggtccgctggccattgtg
gatatcgaaaccaccggcggcaatgtaactcgtgaccgcatcaccgaaattggtattgtg
acggtggatgataaaggcgtgcacgaatggagtacgctgataaacccgggtatggcaatt
cccaagactgtgcaggcgttaaccggaatcgacaatgaaatggtcgccgatgcgccgcgt
tttgagcaggtggcaaaacaaatctggctgcgtctagagggcaaagtttttattgcccat
aatgtccgctttgactacggttttattcgcaatgcgtttgccgacctgggctttcccgta
cagctaaatttgttgtgcacggtgaagctatctcgcgctttatatccggagtttaagcgt
catggtttggaggcaatcattcagcggtttgatattcccacatcggcacggcatcgcgcc
ttggccgacgcccgtgccacctatcattttttaacaatcgcccaacaagaaaagaccgca
gcagcatttatgactgcggtgcaagggcaaacaaggcgccccagcctgccgcctgggctt
gagcccggtgtcatcgagcgcctgccgaacacacccggggtgtattacttttacggcgac
aacgacaatttgttgtacatcggcaaaagcatcaatgtccgcaagcgtgtgatgtcgcac
tttagcgctgataaagccagcgctaaagccatggccatgtgccagcaaattcgcgacatt
caggccgagcccaccaccggtgaattaagtgcgctactgctcgagtcggccgagataaaa
aaacaccagcccatttttaaccgccgcctgcgcagattaagcaagctgtatacattgcaa
ttgcaagaagatgacgcaggcttgctgcgcccgcatattctccccgttggcgaggcccaa
agacagttaaaaatgtacgggttgttcccctcgcagaaaaaagcccgtaacgcattgctc
gaagcggccaagcccgcgggcctttgtgatcatgtggtactcaccgacacacccgcggtt
gttgcctgcatggggtggcagttaaaccgctgtcgcggtttgtgtactggcagtatttcc
acggttcaacacaatgtgtggatgatggaatctctggcaaaacttgcgctgcaagcttgg
ccctatccgggcccggtttgtttgctggaacatgcgcaaaacggcgagcagtacaccgct
tttttgattgataattggtgcctgttagcctctcaatccggcattggtgaaccggatatg
gatgatttacgcgcatcggcggcggagcctgcgctagacagagacttataccgctacctg
agcaaggccattctaaaaggcgcacaacaaactcaattaattcccctgtaa
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