Gilvimarinus sp. DA14: NHM04_02965
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Entry
NHM04_02965 CDS
T08272
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
gil
Gilvimarinus sp. DA14
Pathway
gil02020
Two-component system
gil02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NHM04_02965
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NHM04_02965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gil03021
]
NHM04_02965
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
gil02035
]
NHM04_02965
Transcription machinery [BR:
gil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NHM04_02965
Bacterial motility proteins [BR:
gil02035
]
Flagellar system
Flagellar assembly proteins
Stator
NHM04_02965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_10
UPF0122
GerE
MarR_2
CT_C_D
Ketoacyl-synt_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UTF60777
LinkDB
All DBs
Position
complement(712282..713025)
Genome browser
AA seq
247 aa
AA seq
DB search
MNAASGLAMYSEARVQGNDIQVEEYAGLVKRIAHHMMLKMPASVQVDDLIQAGMIGLLEA
SQKYDGAKGASFETYAGIRIRGAIVDEMRRGDWAPRSVHRNARRVSDAIAKVEAREGRDA
EDAEVAAELEVELDEYHAMLRDANSSRLFSYEETFADDASASLAGEGSDFINPQEGVARD
SLKQSLAEAITQLPEREKMVLALYYDEELNLKEIGQILGVSESRVSQIHSQAASRLRARM
ADWRTED
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcggcaagtgggttagctatgtacagtgaagcgcgagtgcagggcaatgacata
caagtcgaggaatacgccggtttggttaagcgtattgcccatcatatgatgttaaaaatg
cccgccagcgtacaggtggatgatttgattcaagctggaatgatcggcttgttagaagcc
tcgcaaaagtatgatggcgccaaaggcgcgagctttgaaacctatgccggtattcgaatc
cgcggcgccattgtggacgaaatgcgacgtggcgattgggcgccgcgctcggtacaccgc
aatgcccgcagggtcagcgatgccatcgccaaggtcgaggcgcgcgaggggcgcgatgct
gaagacgctgaggtggctgccgagctggaggtggagctcgacgaataccatgcgatgctt
cgcgacgccaactccagccgtctgtttagctacgaagaaacgtttgctgatgatgccagc
gcttcactcgccggggaagggagcgattttataaatccccaggagggggtcgcccgagat
agccttaagcaatccctcgccgaggcaatcacccagctgccagagcgagagaaaatggta
ttggctctgtattatgacgaagagcttaacctgaaagagattggtcaaattttgggcgtt
agcgagtcgcgggtaagtcaaattcactctcaagccgctagccggctacgcgctcgcatg
gccgattggcgaacagaagattga
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