Gilvimarinus sp. DA14: NHM04_03075
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Entry
NHM04_03075 CDS
T08272
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
gil
Gilvimarinus sp. DA14
Pathway
gil02020
Two-component system
gil02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NHM04_03075
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NHM04_03075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
gil02022
]
NHM04_03075
02035 Bacterial motility proteins [BR:
gil02035
]
NHM04_03075
Two-component system [BR:
gil02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
NHM04_03075
Bacterial motility proteins [BR:
gil02035
]
Flagellar system
Flagellar assembly proteins
Others
NHM04_03075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_30
AAA_16
AAA
HTH_24
Mg_chelatase
MCM
AAA_22
HTH_11
AAA_19
AAA_7
nSTAND3
AAA_3
CggR_N
FleQ
MerR
HTH_1
HTH_23
Motif
Other DBs
NCBI-ProteinID:
UTF60798
UniProt:
A0A9J7AAE6
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All DBs
Position
complement(733540..735027)
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AA seq
495 aa
AA seq
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MLSVAEKLPSSSPLARVLVVEDDPDLREALADTLMLAEYDVSEAASAEEALLILKEDAGF
ALIVSDVNMGRLSGYDLLRQVRADYPQIPLVLVTAYASISDSVMAIKEGAVDYLVKPFEP
DALLEVVARHAGMAGTAAGEAPVAQAPSSQKLLQLAQRVAQSESTVLIVGESGTGKEVLA
RYVHDQSPRHDKPFVAINCAAIPENMLEATLFGYEKGAYTGAHSSTPGKFEQANGGTLLL
DEISEMDIGLQAKLLRVLQEREVERLGGRKTIELDVRVIATSNRDMREAVMDGRFREDLY
FRLSILPLQWAPLRDRREDIIPLAEKLLHKHAKKQKRAGVKLDASARAELTCYAWPGNVR
ELDNIMQRALILQPGRIISGEDLGLNQHTGYSEKPSLLAVDKGRRENNSPSASDNVETNK
LDSAVAQPHDTLATGGDEGAVLGQDLKQREFQIIRETLLAEKGSRKNTAERLGISARTLR
YKIARLKDDGYQLDI
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgttaagtgttgcagaaaaactaccaagttcatcccccctggcgcgcgtgctggtggtg
gaagatgatccggatttgcgcgaggctttggccgataccctaatgctcgccgagtatgac
gtcagcgaagcggctagtgcggaagaggcgctactgatcctaaaagaggatgccgggttc
gcgttgatagtttccgacgtcaatatggggcgcctgtctggctatgatttactgcgccag
gtcagagccgactatccccagattccccttgtgttggttaccgcttacgccagcatctcc
gattcggtaatggccattaaagaaggcgcggtggattatctggtgaagccctttgagcct
gatgccttgcttgaggtggttgcccgccacgcgggcatggcaggtactgcggccggtgaa
gcgccggttgcacaagcgccatccagccaaaagttattgcagctggcgcagcgggtggcg
cagtcggaatctacggtattaattgtcggcgaatctggtacgggcaaagaggtactggcg
cgctacgtccacgatcagtcgccgcgccatgataaaccttttgtcgccattaactgtgcc
gctattcctgaaaacatgttagaggcgaccttattcggttacgaaaaaggggcctacacg
ggcgctcatagcagcactcccggtaagtttgagcaagccaatggcggtaccctgctgctg
gatgaaatttcagagatggacatcggtttgcaagccaaattgctgcgcgtgctgcaagag
cgagaagtggagcgcttgggtgggcggaaaaccattgagttggatgtgcgggttatcgcc
acctccaaccgtgatatgcgcgaggcggttatggatggacgctttcgcgaggacttgtat
tttcgcttgagtattttgccgctgcagtgggcgccgctgcgcgatcggcgcgaagatatt
attccgctcgcagaaaagctgttgcacaaacacgccaaaaagcaaaagcgcgccggggtg
aagttggatgccagtgcccgcgctgaacttacttgctacgcatggccaggcaatgttcgc
gagctcgataacattatgcagcgagcgttaatcctgcaacctggccgtattattagcggt
gaagatctggggttaaaccaacacacaggctacagcgaaaaacccagtttattggcggtc
gataagggacggcgtgagaataattccccgtcagcgagtgataatgttgaaaccaataaa
cttgattcggcagtcgcacagccgcacgacactctagccaccggcggcgatgagggtgcg
gtattgggtcaggatttgaagcagcgcgagtttcagattattcgcgaaactcttttggca
gaaaaaggcagtcgtaaaaataccgcagagcgcttgggaatcagtgctcgcacattgcgc
tacaaaatcgctcgcctaaaagatgatggatatcagctggatatttaa
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