Gilvimarinus sp. DA14: NHM04_03085
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Entry
NHM04_03085 CDS
T08272
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
gil
Gilvimarinus sp. DA14
Pathway
gil02020
Two-component system
gil02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NHM04_03085
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NHM04_03085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gil03000
]
NHM04_03085
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
gil02035
]
NHM04_03085
Transcription factors [BR:
gil03000
]
Prokaryotic type
Helix-turn-helix
Other families
NHM04_03085
Bacterial motility proteins [BR:
gil02035
]
Flagellar system
Flagellar assembly proteins
Others
NHM04_03085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
HTH_50
AAA_16
nSTAND3
AAA_7
AAA_22
AAA
ATPase
HTH_30
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
UTF60800
UniProt:
A0A9J7A8X5
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All DBs
Position
complement(736503..737945)
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AA seq
480 aa
AA seq
DB search
MSQNNKVLVLEDDAQRVSALNTVFTFLGDGVHFCGAKELETILQSNPLESDYSLIIIGET
GQPELQAYVEALSAWDDEVAVATFGESRPTLESVAAESQERVIGHLDLPVRYNPLVDLLH
RAQMYRQAQQTNKKHVQRRPVHLFRSLVGTSREVSHVREMMSQVADKDVSVLITGESGTG
KEVVARNLHYHSARRDKPFVPVNCGAIPGELLESELFGHEKGAFTGAISARAGRFELAEG
GTLFLDEIGDMPLSMQVKILRVLQERCYERVGSNKTVMTDVRIIAATHRNLETMIENGEF
REDLYYRLNVFPIELPSLKDRSEDIPLLINELVSRMESEKRGSIRFNSAAILSLCRHSWS
GNIRELANLVERMAIMHPYGVVGVSDLPTKYRHVECEEEPFVIDSAPAETAKGTTVVSMN
DTPLLPDQGIDLREYLTRLEKDLIQQALNDCGGVVARAADKLSIRRTTLVEKMRKYDLQR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaaacaataaagtgctggttttagaagacgacgcacagcgggtctccgcactg
aacactgtgtttacctttcttggcgatggcgtccatttttgtggcgctaaagagctggaa
acaatactgcaaagcaaccctctggaaagcgactacagcctgattattattggcgagacg
ggccagcccgagctgcaggcttacgttgaggccttgagcgcgtgggatgacgaagtggcc
gtggcgacttttggcgagtctaggcccacccttgaatcggttgcggcggagtctcaagag
cgggtgattggccatttggacttacccgtgcgctacaacccgctggttgacttgttgcat
cgggcgcaaatgtaccgacaggctcagcagaccaataaaaaacacgtacagcggcggccc
gtgcatttatttcgctcgttggtgggaaccagccgcgaggtcagccacgttcgcgagatg
atgtcgcaggtggccgataaagatgtgtcggtattgattaccggggagtcgggtaccggc
aaagaagtggtggcgcgcaacctccactatcattctgcgcgccgcgataagcccttcgtg
ccggtaaattgtggcgcaattcccggcgagttgctggagagtgaattgtttggccacgag
aaaggcgctttcaccggagctatttctgcccgtgcaggccgttttgagttggccgaaggc
ggcaccctgtttctggatgaaatcggcgatatgcccctaagtatgcaggtgaagattctg
cgcgtactgcaggagcgctgttatgagcgagtgggaagcaataaaaccgttatgacggac
gtgcggattatcgcggctacacatcgaaaccttgaaaccatgattgaaaacggcgagttc
cgcgaagacctctactatcgcctcaacgtttttcccattgaattgccctcactgaaagac
cgatctgaagatattccgctgctgattaacgagctggtgtcgcgaatggaaagcgagaag
cgcggctcaattcgttttaattcggcggcaattttgtcgctatgccgtcacagctggtcc
gggaatattcgcgaattggcaaacctggtagagcgtatggcgatcatgcatccctacggc
gtagtcggtgtgtccgatttgcctaccaagtatcgtcacgtggagtgtgaagaggagccc
tttgtcatcgactcggcgcccgccgaaacggctaagggtacgacggtggtgagtatgaac
gacacgccactgctaccggatcagggaatcgacctgcgagagtatttgactcgcttggaa
aaagatttgattcagcaggcgcttaacgactgtggcggggtagtggcccgcgctgcggat
aagctttcaattcggcgcaccaccttggtggagaaaatgcgcaaatacgatttgcagcgc
tga
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