Gilvimarinus sp. DA14: NHM04_04305
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Entry
NHM04_04305 CDS
T08272
Name
(GenBank) heparinase II/III family protein
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
gil
Gilvimarinus sp. DA14
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NHM04_04305
Enzymes [BR:
gil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
NHM04_04305
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Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
Motif
Other DBs
NCBI-ProteinID:
UTF61027
UniProt:
A0A9J7AAM3
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Position
complement(988601..990760)
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AA seq
719 aa
AA seq
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MRLPSFFVRAGAIGCLLLGCYQTAVAESPSLVISETDIAALREASAGLLEQSKKDNKRVA
DEALAAGVVVPWPKDAGGGYTHEQHKRNYKAMYAAAMQYQLSGDSLYSDYVGAMLSAYAD
MYPQLGLHPEKKEQTPGKLFWQSLNEAVWLVYAIQAYDMVAQTFTDEQNDRFQRELFYPV
ADYLSKGQPQTFDKIHNHGTWAVAAVGMVGYATGRHDYVEQALKGLDKSGESGFYKQLDE
LFSPDGYYTEGPYYQRYALMPFVWFAKAIETNEPQKAIFEYRDGILLKAIYTTIELSYNG
LFLPINDAIKDKGIKTEELVQALAIAFEITSDKTLSDIARQQEKVSLSAGGVALSEIIAN
NEVAPYDYESKTYRDGAKGDQGALTLMRSGDNETGTLVVAKNTSQGMGHGHFDRLSWQLY
DNGQEVVTDYGAARYLNVEAKYGGHYLPENDSWAKQTVAHNTLVVDQKSQFGADLDKANQ
HAAEQVAFVRDDLADISIGRIDTAYKGVQMSRVQALVKPDSIEPFVIDLFSVRADAKHSY
DLPLHFNGQIIDHNLSDAETFNAWGAMGDDNGYQHMLLRAQGSNADHSNRLTWLLDNRFY
SYTYGYQAEAGENAQTLFFQLGANDPNHNLRRDQGIVRRLDARDAVMYAVIEPHGEYNGT
AEYVQDAYSRIKSLRYTTTDTGATLTVNMGDAGTYELVVSSDGKGLVPVNAKVSKISDN
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaccttctttttttgttcgagcgggagccattggttgccttctattaggttgt
tatcaaacggccgtcgccgagtcgccttcattggttattagcgaaacagacattgctgct
ttgcgagaagcgtccgctgggctgttggagcagtccaagaaggataataaacgagtcgct
gatgaagctcttgccgcaggtgtagtggttccctggcccaaagatgcaggtggtggctat
acccacgagcagcacaaacgcaactataaagcgatgtacgcagccgccatgcagtatcag
ttaagtggcgatagtctttatagtgattatgtgggtgcaatgctatctgcttacgcggac
atgtatccacagttaggtctgcatcctgaaaagaaagagcaaacgcctggtaagctattt
tggcagagtctgaatgaggccgtgtggctggtgtacgccattcaggcctacgatatggtg
gctcaaacatttacggatgaacagaacgatagattccagcgtgaattgttctatccagtg
gcggattacttatctaagggacagccgcagacctttgataagatacataaccatggcaca
tgggccgtcgctgcagtgggtatggttggctatgctacgggtcggcatgactatgttgaa
caggccttaaaggggttggacaaaagcggcgaatctgggttctataaacagttggatgag
cttttctctcccgatggctattacacagaggggccatactatcagcgctatgccctgatg
ccatttgtgtggtttgctaaagctattgaaaccaacgaacctcaaaaagcaatttttgag
tatcgcgacggcattttgcttaaggcgatttataccaccattgagctaagttataacggt
ctttttttaccgattaacgacgctattaaagacaaaggcataaaaacagaggagttagtt
caagctctagcgattgcatttgaaatcacctcagataagaccttgagcgatattgctcgg
caacaggagaaggtcagtctgagtgcaggtggagtggctctttctgagattattgcgaac
aatgaagtagcgccatatgactatgagtctaaaacttatcgcgatggcgcaaaaggcgat
caaggtgcattgaccctgatgcgatccggcgacaatgaaacagggactctggtggtagca
aaaaataccagtcagggcatggggcatggccactttgaccgcttaagctggcagctgtat
gacaacggccaggaagtggtaactgattatggcgctgctcgttacctcaatgttgaggca
aagtatggcggtcactaccttccagaaaatgacagctgggcgaagcaaacggtagcccac
aacacccttgttgtggatcaaaagagccagtttggtgctgacttggataaggcgaatcaa
catgccgctgagcaagttgcttttgtacgagacgatttggccgacattagcattggccgt
attgataccgcttacaaaggcgtgcagatgagccgcgtgcaagctttggtaaaacctgac
tccatagagccctttgtgattgacctattcagcgtgcgggcggatgctaagcacagctat
gatctgccactgcatttcaacgggcagattattgatcataacctgagcgacgctgaaaca
tttaatgcatggggagccatgggcgatgacaacggttatcagcatatgctgttacgcgct
caggggagcaacgctgaccacagtaatcgcttgacctggttgctggataatcgtttctat
tcttacacctacggttatcaagcagaagctggtgaaaatgcgcagacgttattttttcag
ctgggagcgaatgatccgaatcacaatcttcgtcgtgatcagggaattgttcgccggcta
gacgcacgcgatgccgtgatgtacgcagtaattgagcctcatggtgagtacaacggtacc
gccgaatatgttcaagatgcttacagccgaataaaaagtttacgttataccacgacggac
accggtgctacgcttactgtaaatatgggtgatgcgggaacctacgaacttgttgtttcc
agtgatggcaagggattggtgccggttaatgccaaggtttcaaaaattagtgataactaa
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