KEGG   Gilvimarinus sp. DA14: NHM04_04390
Entry
NHM04_04390       CDS       T08272                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
gil  Gilvimarinus sp. DA14
Pathway
gil03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:gil00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    NHM04_04390 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gil03019]
    NHM04_04390 (rnc)
   03009 Ribosome biogenesis [BR:gil03009]
    NHM04_04390 (rnc)
   03036 Chromosome and associated proteins [BR:gil03036]
    NHM04_04390 (rnc)
Enzymes [BR:gil01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     NHM04_04390 (rnc)
Messenger RNA biogenesis [BR:gil03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NHM04_04390 (rnc)
Ribosome biogenesis [BR:gil03009]
 Eukaryotic type
  90S particles
   RNase
    NHM04_04390 (rnc)
 Prokaryotic type
  rRNA processing factors
   NHM04_04390 (rnc)
Chromosome and associated proteins [BR:gil03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     NHM04_04390 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: UTF61044
UniProt: A0A9J7A9H7
LinkDB
Position
complement(1014615..1015295)
AA seq 226 aa
MSDILLTRLQQRLGYQFKDITRLQLALSHRSVGAANNERLEFLGDSIVNFLVGEALFEQF
PKAREGQLSRLRSQMVKGETLAELAREFELGECLSLGEGEMKSGGHRRDSILADAVEAII
GAIYLDSDMPSCRTRVLQWYDSRLQALSLENPAKDAKTRLQEYLQSRREPLPDYQVVAVA
GEAHAQMFTVECHVSLLDTPESARASSRRAAEKQSAAQALKRLGVS
NT seq 681 nt   +upstreamnt  +downstreamnt
gtgagcgatattttactgacacgtctgcaacagcgcttgggttatcagtttaaagacata
acccggctacagctcgccctaagccatcgcagtgtgggtgcagcaaacaacgagcgattg
gagtttctgggggactcgattgtcaacttcctggtaggtgaagcgctctttgaacaattc
cccaaggcccgagaggggcaattgagtcgcctgcgctcgcaaatggtcaaaggcgaaacc
ctggctgagctggctcgtgagtttgagttgggcgagtgcctgagcttgggtgaaggcgaa
atgaaaagcggcggccaccgacgcgattcaattctggccgatgcagtagaggccattatt
ggtgctatttatctcgattcagatatgcccagctgccgcacgcgggtactgcagtggtac
gactcacgcttacaagccctgagtttggaaaacccggccaaagacgccaaaacccgcttg
caagagtatttgcaatccaggcgcgagccgctgccggattaccaggtggtggccgtggct
ggcgaggcacacgcgcaaatgttcaccgttgagtgtcatgtgtcgctgctagatactccc
gaaagtgcgcgcgccagcagtcgtcgcgccgccgaaaaacaatccgccgcgcaagcgctg
aagcgccttggggtcagttag

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