Gilvimarinus sp. DA14: NHM04_04595
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Entry
NHM04_04595 CDS
T08272
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gil
Gilvimarinus sp. DA14
Pathway
gil03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NHM04_04595 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gil03400
]
NHM04_04595 (ung)
Enzymes [BR:
gil01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NHM04_04595 (ung)
DNA repair and recombination proteins [BR:
gil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NHM04_04595 (ung)
Prokaryotic type
NHM04_04595 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
UTF61083
LinkDB
All DBs
Position
complement(1052333..1053016)
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AA seq
227 aa
AA seq
DB search
MSEAKPIQLEPGWLAELEGEFEKPHMQALKAFLQREKQAGKTIYPPSPLMFNAFNSTPFK
QVKVVILGQDPYHGPGQAHGLSFSVPIGVRPPPSLQNMFKEIERDLGIPRPDHGCLQNWA
DQGVLLLNATLSVEQGRAGSHQNQGWEQFTDAAIDALNRDREGLVFLLWGSYAQKKGRLI
DTRKHLVLTSPHPSPLSAHRGFIGNGHFAKANEYLQARGVEPIDWRL
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaggcaaaacccattcaactggagcccggctggctggccgagcttgagggcgaa
tttgaaaagccccatatgcaggcgttaaaagcttttctgcagcgcgaaaagcaagcgggt
aaaactatctatccgccgtcgccgttaatgtttaacgcgttcaattccaccccgtttaag
caggtcaaagtggtgattttggggcaggacccctatcacggcccagggcaggcccacggc
ttaagcttctccgtgcccattggggtgcgcccgcccccctcgctgcaaaacatgtttaaa
gagatagagcgtgacctgggtattccgaggccagatcacggctgcctgcaaaactgggct
gaccaaggcgtactactgttaaacgccacgctcagtgtcgagcaaggcagagctgggtcg
catcaaaatcaggggtgggagcaattcacagatgcggccatcgatgcactcaaccgagac
cgcgaagggctagtgtttttgctgtggggcagctacgcacagaaaaaagggcggttgatc
gatactcgcaaacatctggtgctaacctcgcctcacccctcgccgctgtccgcccatcgc
gggtttataggtaacgggcattttgctaaagcgaatgagtatttacaggccagaggggta
gagccgattgattggcggctgtga
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