Gilvimarinus sp. DA14: NHM04_05795
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Entry
NHM04_05795 CDS
T08272
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
gil
Gilvimarinus sp. DA14
Pathway
gil00550
Peptidoglycan biosynthesis
gil01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NHM04_05795 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gil01003
]
NHM04_05795 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gil01011
]
NHM04_05795 (mrcB)
Enzymes [BR:
gil01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
NHM04_05795 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NHM04_05795 (mrcB)
Glycosyltransferases [BR:
gil01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
NHM04_05795 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
gil01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
NHM04_05795 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
efb-c
DUF4248
Motif
Other DBs
NCBI-ProteinID:
UTF61313
LinkDB
All DBs
Position
complement(1291642..1294032)
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AA seq
796 aa
AA seq
DB search
MQNNRAPGKDTDRDPMTKRRTPAPRRRARKKKPTQKRHGRSLFKILLIYAVLASLIVGGL
WVVYLDFVVRDKFDGKKWSLPARVYARPLELYEGAAVTPNLLELELTALGYRAVESVSRP
GYFSRHRAGGYTRYRIYSRGFEFWDGRDKALLFDVVLGPSGVASLTAQDEHIPLVRLEPE
QIGGIYPTQAEDRLLVQLSDLPPLLGEALLAVEDKDFLDHYGVSPTAIARAAWVNLRSGQ
VVQGGSTLTQQLVKNFYLTHERSLTRKAQEAIMSVLLEVHYSKSEILETYINEVYLGQSG
ARAIHGFALASQYYFRQPVSELNAQQVALLVGLVKGASFYNPWRNPERATKRRNLVLSVM
HREGLINDAELKQAQAAPLGVVKPGQNSQSTYPAFVELVKRQLARDYKEEDLRSDGLRIF
TTLSPMVQRQAEEAVAKRLDNLESAYKVDGLQASMVVTSVGAGEVLAMVGDRNPRYAGFN
RALDAQRPVGSLMKPFVYLAALEQPAAYNLGSPIADEPVTVTSDDGKLWEPQNYSRQSHG
QVPLIEALAHSYNQATARLGMQLGLRQVAHTLERAGFDGYIPPVPAMTLGAIDMSPYEVA
GIYHTLAAEGTYTPLRAIRDVLTATGEPLKRYPLQIEQRFSGAGVFELQYALQAALREGT
GRQVYHRFPADLPLAGKTGTTNDQRDSWFAGFSGEHLAIAWVGRDNNAETPLTGSGGALK
VWADLMSELPTRGVNTEAPEGVTFDWIDRASGKLSAEGCEGAMWLPLHSDYLPSDAVSCR
LDNTGGTRSWWQRFWN
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataaccgcgctccaggcaaagacactgaccgagacccaatgaccaaacgccgt
acgccagcaccgcgccgccgcgcccgcaagaaaaagcctactcaaaagcggcacggccgc
tctctatttaaaattttgttgatctacgcggtcttggccagcctgattgtgggcggctta
tgggtggtgtacctggactttgtggtgcgcgataagtttgatggcaaaaagtggtcgctc
ccggcgcgggtgtacgcccgtccgctggaactgtacgaaggcgccgcagtgaccccaaac
ctgctggagttggaattgaccgcactgggttatcgcgcggttgaaagcgtcagccgcccg
ggttatttcagtcgtcaccgcgcgggtggctatacccgctatcgcatttacagtcgcggc
tttgagttttgggatggccgggataaagccttgctgttcgatgtagtgctgggcccatct
ggggtggccagcctgacggcgcaggatgagcacattccactggtgcgtctggaaccggag
caaattggcggcatctaccccacccaggccgaagaccggctgttggtgcaattatccgat
ttaccacccctgctgggcgaggctctgctggcggtcgaggacaaagattttctcgatcac
tacggcgtatcgcccacagcgattgcccgtgccgcctgggtaaatttgcgttcgggccaa
gtggtgcagggcggcagtaccttgactcagcagctggtaaaaaacttttacctcacccac
gagcgcagcctgacccgtaaagcgcaggaagcgattatgtcggtgttgctggaggtgcat
tacagcaaatcggaaattctggaaacctacattaacgaggtgtacctgggccagagtggt
gcccgtgccattcacggttttgccctggcgtcgcagtattattttcgccagcccgtgtct
gagctgaacgcgcagcaagtggcgctgttagttggcttggtaaaaggggcttcgttttat
aacccctggcgcaaccccgagcgggccaccaagcgccgtaatttggtgctgagtgttatg
catcgcgaggggctgattaacgacgccgagctcaagcaggcacaggcggcacctttgggg
gtggtcaaacctgggcagaactcgcaaagcacttaccccgcctttgttgaattggtcaaa
cgccagctggcgcgggactacaaagaagaagacctgcgcagcgacgggctgcgtattttc
accactttgtcgcccatggtgcagcgccaggccgaagaggcagtggctaagcgtttggat
aatctggagtctgcctacaaggtggacgggttacaggcgtcgatggtggtgacttcggtg
ggtgccggtgaagtgctggccatggtgggggatcgcaaccctcgctacgccggttttaac
cgtgccctggatgcccagcgcccggtgggctcgctgatgaaaccgttcgtgtacctggcg
gcgctggagcagcctgccgcttacaacctgggctcgcccatcgccgatgagcccgtgacg
gtaaccagcgacgacggcaaactctgggagccgcaaaactactcgcgccaaagtcacggc
caggtgccgttgatcgaggcgttggcgcattcctacaaccaggccaccgcccggctgggt
atgcaattgggattgcgccaagtggctcatacgctggagcgcgccgggtttgacggttac
ataccaccggtaccggccatgacattgggcgccatcgatatgtcgccctacgaggtggcc
ggtatttatcacaccctggcggccgagggtacttacaccccgctgcgggctattcgcgat
gtgctgaccgccaccggcgagcctcttaagcgttatccactgcaaatagagcagcgcttt
agcggtgcgggcgtttttgagctgcagtatgcgctgcaggcggcgctgcgcgaaggcacc
ggcaggcaggtgtaccaccgcttcccggctgacctacccctggcgggtaaaaccggtact
accaatgatcagcgcgacagctggtttgccggattcagtggcgagcatttggccattgcc
tgggtggggcgtgataataacgccgaaacaccgctgaccggcagcggcggcgcgttaaaa
gtgtgggcggatttaatgagcgaattgcccacccgaggcgtgaacaccgaagcgcccgag
ggggtaacctttgactggattgatcgggcctcgggcaagctcagcgccgagggttgtgaa
ggcgccatgtggctgcctctacacagtgactacctccccagcgacgcggtaagctgtcgg
cttgataacacaggcggcacacgcagctggtggcaaagattttggaattga
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