Gilvimarinus sp. DA14: NHM04_06660
Help
Entry
NHM04_06660 CDS
T08272
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
gil
Gilvimarinus sp. DA14
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gil03009
]
NHM04_06660 (dbpA)
Enzymes [BR:
gil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NHM04_06660 (dbpA)
Ribosome biogenesis [BR:
gil03009
]
Prokaryotic type
rRNA helicases
NHM04_06660 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
Cas3-like_C_2
AAA_30
HK97-gp10_like
AAA_22
P-loop_SecA
Helicase_C_2
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
UTF61472
UniProt:
A0A9J7AAS8
LinkDB
All DBs
Position
complement(1501328..1502719)
Genome browser
AA seq
463 aa
AA seq
DB search
MSDSQTQFSRLSLQPELQQNLKSLGYTSMTPIQAESLPAIIAGRDVIGQGKTGSGKTAAF
GLGVLNALEVKRFCVQALVLCPTRELADQVAKEIRRLARAIHNIKVLTVCGGMPFGPQIN
SLEHGAHIVVGTPGRVEEHIRKNNLDLSQLSMLVLDEADRMLEMGFAEALDAVIAAAPVK
RQTLLFSATYPPKIEQIAKRVMREPLLVKVESSHDTSSIQQSFYAVTDESSRLRAVQLLL
LQHQPESAVVFCNTKRETQQVADALSAQGFSALALHGDLEQRDRDITLVRFANKSATVLV
ATDVAARGLDIENLDMVINYQLARDSEVHVHRVGRTGRAGAKGIACNLHSDKEHYKLLLL
EEEQGLEVSNTPLPKIDVANAQAPQPAMVTLQIDGGKKQKVRPGDILGCLTGDKGIDGGA
VGKINIADNSSFVAVKRAQMKKALDKIRNGKLKGRQFRVRVVS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgacagtcaaacccagttttctcgcctgagcctgcaacccgaattgcaacaaaat
cttaaatcccttggctatacatccatgacgcccattcaggcggagagtttaccggccatt
attgccgggcgtgatgtgattggccagggcaaaaccggctcgggtaaaaccgctgcgttt
ggcttgggagtacttaatgcccttgaggtcaaacgtttctgcgtgcaggcgctggtgctt
tgccccacgcgcgagttagccgatcaggtggccaaagaaattcgtcgcctagcgcgggcg
attcacaatattaaagtgctgacggtttgcggcggaatgcctttcggcccgcaaatcaat
tcgctggagcatggcgcgcacattgtggtgggcacgccggggcgggtggaagagcacatc
cgcaaaaacaatttggatttaagtcagctatcgatgttggtgctggacgaagcggatcgc
atgttggaaatgggctttgccgaagcgctggatgcggtgattgcagcggcaccggtgaag
cgtcaaacgctgctgttcagtgcgacttatccgcccaaaattgaacagattgctaagcgg
gttatgcgcgagccgctgttggtgaaagtagagtccagccacgacacctctagcattcag
cagagcttttatgccgttacggacgagtcgtcgcgtttgcgtgccgtacagttattgctc
ttgcagcaccagccggaatccgctgtggtgttttgcaataccaagcgtgaaacccagcaa
gtagcggatgctttatcggctcaggggttcagtgcattggcattgcatggcgacttggag
cagcgtgatcgcgacattaccctggtgcgctttgccaacaaaagtgccacggtgctggtg
gctaccgatgtcgccgctcgcggtctggacatcgaaaatttggacatggtaattaactac
cagctcgctcgtgacagcgaagtacacgtgcatcgggtggggcgtaccgggcgcgcgggt
gcgaaaggtattgcctgtaatctgcacagcgataaagagcactacaaactattattgttg
gaagaagagcaggggcttgaggtatccaacaccccattacctaaaatagacgtggccaat
gcccaggcgccgcaaccggcgatggtgacactgcaaatagacggcggaaaaaaacagaaa
gtccgccccggcgatattctgggttgcctgaccggagacaagggtatcgatggcggtgcc
gtgggtaaaattaatattgccgataactcatcgttcgttgcagttaagcgtgcgcagatg
aaaaaagctttggataaaattcgcaacggcaagttgaaaggtcggcagtttcgggtgcga
gtggtgagttga
DBGET
integrated database retrieval system
