Gilvimarinus sp. DA14: NHM04_07715
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Entry
NHM04_07715 CDS
T08272
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
gil
Gilvimarinus sp. DA14
Pathway
gil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NHM04_07715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gil03400
]
NHM04_07715
Enzymes [BR:
gil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NHM04_07715
DNA repair and recombination proteins [BR:
gil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NHM04_07715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
ADDB_N
WHD_PriA
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
UTF61667
LinkDB
All DBs
Position
1746915..1749113
Genome browser
AA seq
732 aa
AA seq
DB search
MTELFCVQVALPVPLRQLFDYRLAPASAPATVGARIRVPFAGRELVGVIMAVKASGTVAP
EKIKSAIELLDPEPVLPADIVQLLSWAADYYHCPIGEAIQAALPVLLRQGEPPEYQQDPH
SRYWQLTPEGQGLPDQPLRKAPRQAELILYLREQGPSRWQDLKTAGFARDALKRLCERQL
IEPTHAPRRQFSPQAALPLNEDQRLALDNIDLSKYNTYLLDGITGSGKTEVYLQAIARTL
EANPLAQTLVLVPEIGLTPQTIRRFERRFDEDIVTLHSGLSDRERLNAWTKASDGSARII
IGTRSAIFTPLRHPSLIIVDEEHDGSFKQQDGFRYSARDLACLRAKNLGIPIILGSATPA
LESLYNARRQRYTQLKLRQRANQQAAPRIQIVDSNECAPDRSITDFSMNAIRRHLDAGNQ
VLVFLNRRGYAPTLQCYDCGSQVLCPNCDARLTLHQQPRHLHCHHCDYQSPALTRCSNCN
SHKLLALGSGTERSEELLARELPGTDIIRIDRDSTRQKNSLENKLASIKSGGPCVLVGTQ
MIAKGHHFPDVTLAIILDVDSGLLSADFRGPERMGQLITQVAGRAGRAQKPGEVILQSRT
PEHPLLNLLVQQDYQQFAEAILTEREITLMPPYSHLALLRADAPNAEQALHFLQGLRIFS
DSLPHDPALQVLGPMPSLMEKRGQRFRYLIQLKSTSRGLLNQHLQILAHHISELKPHRNL
RWSIDVDPQDMS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactcttctgcgtacaagtcgcgctgcccgtacccttgcgacaacttttcgac
tatcgcctagccccagcctctgcccccgcgacagtgggcgcgcggattcgtgtgcccttc
gctgggcgcgaactggtcggggtaataatggcagtaaaggccagtggcacagtcgccccc
gagaagatcaagtccgccatcgaattactggaccccgaacctgtcttgccagcagacata
gtgcaattgttaagttgggcggcagactattatcactgccctattggtgaagcgatacaa
gctgccttgccagtcttactgcgccaaggcgaacctcccgagtaccagcaagatccacac
agccgctactggcaattgaccccggagggacaggggctgccggaccaaccactgcgcaag
gcgccgcgccaagctgagctcatactctatttgcgcgagcagggccccagccgctggcaa
gatttaaaaaccgcgggttttgcccgcgatgctctcaaacgcctgtgcgagcggcaactc
atcgaaccaacccacgcccccaggcgccaattctccccccaggctgctctacccctaaac
gaagaccaacgcctggctttggacaatattgatctgagtaaatacaacacctatttgctc
gatgggatcacgggcagcggcaaaaccgaagtgtatttacaagctattgcccgcactcta
gaagcgaacccgctggcacaaaccctggttttagtccctgagatcggcctaacgccacaa
accattcgccgcttcgagcgccgctttgacgaagatatcgtcaccttgcattcggggctg
tccgatcgcgagcgcctgaacgcctggaccaaagcgagcgacggcagtgctcgtattatt
attggcacccgctcggcaatatttaccccattgcgccaccccagcctgattatcgtagat
gaagagcacgacggctcatttaaacaacaggatggctttcgctactcagctcgcgacctg
gcttgcctgcgagccaaaaaccttgggattccaatcatactcggcagcgccactcccgca
ctggaatcgctctacaacgcccgccgccagcgctacactcagctaaagctgcgccagcgc
gccaaccaacaagccgcacctcgcattcaaatagtcgacagcaatgagtgtgctcctgac
agaagcatcaccgacttcagcatgaatgccattcggcgccacctcgatgcgggcaatcag
gtattggtgtttctcaaccgtcgcggttatgcccccaccctgcaatgttacgactgcggc
agccaagtcctctgtcccaactgcgacgccagacttaccttgcatcaacagcccagacac
ctgcactgccatcactgtgactaccagagccccgcgcttacacgttgcagcaattgcaac
agccacaaattgttagcgctgggctcgggtaccgagcgcagcgaagagctgttagcccgc
gagctgcccggtacagacatcattcgtattgaccgcgactccacccgccagaaaaactcg
ctggaaaacaaactggccagcatcaaaagtggtggcccctgtgtattagtaggtacgcaa
atgatcgccaagggacatcactttcccgatgtgaccctggccattattctcgatgtagac
agcggcctgctgagcgccgactttcgcgggcccgagcgcatgggccaactgatcacccag
gtggcgggccgggctgggcgcgcgcaaaagccaggggaagtgattttacaaagccgcacg
cctgagcacccgctgctgaatttactggtacagcaggattaccagcaatttgccgaagcc
atcctcaccgagcgcgagattaccctgatgccgccctacagccatttggcactactgcgt
gccgacgcccctaacgcggagcaggcgctgcactttctccagggcttgcgcatcttcagc
gatagcttaccccacgacccagccctgcaagttctcggccccatgccctcattgatggaa
aaacgcgggcagcgctttcgctacctgatacagctaaaatccaccagccgagggctactg
aatcaacacctgcagatcctggcgcatcacattagcgagctaaaaccccatcgcaactta
cgctggtcaatcgacgtggatccacaggatatgagctga
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