Gilvimarinus sp. DA14: NHM04_08135
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Entry
NHM04_08135 CDS
T08272
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
gil
Gilvimarinus sp. DA14
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gil03009
]
NHM04_08135 (rluD)
Enzymes [BR:
gil01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
NHM04_08135 (rluD)
Ribosome biogenesis [BR:
gil03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NHM04_08135 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UTF61747
UniProt:
A0A9J7ACN9
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All DBs
Position
complement(1852064..1853017)
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AA seq
317 aa
AA seq
DB search
MSNTIELAAAVPPECRGQRFDQVAALLFPDYSRERLKEWIKAGQLTVNGASGKPKDKLLG
GEALALQAELASDDTWEAEDIALDIVFEDEHLLVVNKPAGLVVHPAAGNYSGTLVNALLH
HNPDQAQLPRAGIVHRLDKDTTGLMVVAKTLAAHHNLVSQLQARSVSREYEAIAIGQFTG
GGKVDAPIGRHPKQRKLMAVVPISGKEAVTHYRVLQRFKHHAHLRLKLETGRTHQIRVHM
AHINHPLVGDPVYGGRFRKPQGASAELLQTLREFPRQALHAASLGLVHPFTEELMSWQAP
LPEDMLQLLAALEDDSD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataccattgagcttgccgccgcagtgccacccgagtgtcgggggcagcgattt
gaccaggtggcggcactcttgttccccgattactcccgcgagcggctaaaagagtggatc
aaagccgggcagttaaccgttaacggtgcatccggcaaacccaaggacaagctactaggt
ggcgaggctctggcgctgcaggcagaacttgccagcgacgatacctgggaggcagaagac
attgccctggatatcgtctttgaagatgagcaccttttagttgtgaataaaccggcgggg
cttgtggtgcatccagcggcgggcaattacagcggcaccctggtcaatgcgcttttgcac
cataaccccgatcaggcgcagctgcctcgggcgggtattgtgcaccggttggataaagac
accacagggttaatggtggtggcgaaaaccctggcggcacaccacaacctagtgtcgcaa
ctgcaagcgcgcagtgtcagccgtgagtatgaagctattgctatcggtcagtttaccggt
ggtggcaaggtggacgcgcccattgggcgccaccctaagcagcgtaaactgatggcggtg
gtgcccatcagcggtaaagaggctgttactcactaccgagtattacagaggtttaagcac
catgctcatttgcgccttaagctggagacggggcgcactcatcaaattcgcgtgcacatg
gctcatattaatcatccactggtgggcgaccctgtatacggcggccgttttcgcaaaccc
cagggagcgtccgccgagctgttgcaaacgctgcgcgaatttccccgccaagcactgcac
gccgcaagcctcgggttagttcaccctttcacagaagagctcatgagctggcaggctccc
ttgcccgaggatatgctgcagttattggccgcgctggaggacgatagtgactga
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