Gilvimarinus sp. DA14: NHM04_08235
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Entry
NHM04_08235 CDS
T08272
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
gil
Gilvimarinus sp. DA14
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gil03400
]
NHM04_08235 (radA)
DNA repair and recombination proteins [BR:
gil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NHM04_08235 (radA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
Lon_C
DnaB_C
SLFN-g3_helicase
AAA_22
RecA_N
AAA_16
nSTAND_NTPase5
GvpD_P-loop
Rad51
nSTAND3
AAA_30
ABC_tran
PAXNEB
AAA_24
Zeta_toxin
AAA_14
Zn_ribbon_Thio2
AAA
Zn_ribbon_8
Viral_helicase1
cobW
NTPase_1
DUF7767
DZR
Herpes_Helicase
HypA
DUF7129
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UTF61764
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All DBs
Position
complement(1876869..1878242)
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AA seq
457 aa
AA seq
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MASKQKVAYVCNECGADFSKWQGQCSECGTWNSVVEMKLGPAPKGGARNAQFSGYAGSAG
SKVQTLADISLEDLPRLSTGTGEFDRVLGGGLVPGSVVLIGGHPGAGKSTVLLQTLCKIA
EQLSCLYVTGEESLQQVAMRANRLGLPTDKLQMLSETSVELIGQAAEQLQPKVMVVDSIQ
VVHLSDIQSAPGSVSQVREAAAYLTRFAKQTGTVVILVGHVTKDGSLAGPKVLEHMIDCS
ILLEGSHDSRFRTLRGNKNRFGAVNELGVFAMTEKGLKEVSNPSAIFLQRGDEVASGSVV
MVMWEGTRPLLVEIQALVDDSHLGNPRRVAVGLDQNRLSMLLAVLHRHGGVLVGDQDVFV
NVVGGVRVAETSADLALVLAIVSSFRDRPLAHDLMVFGEIGLSGEIRPVPSGQERLREAA
KHGFKRAIVPIGNAPKAMDGIEIVAVKSLSEALAAIE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctagcaaacaaaaagtcgcttacgtctgcaatgaatgtggtgccgatttctccaag
tggcaggggcagtgcagcgagtgtggtacctggaactcggtggtggaaatgaaattgggg
ccggcgcccaaaggcggggcgcgcaatgctcagtttagtggttacgccggtagcgctggc
tccaaagtgcagactctggcggatatcagcctggaggacttgccacgtttgagtaccggc
acgggtgagtttgaccgggtgctgggcggtggcctggttcccggctcggtggtgttaata
ggcgggcacccaggcgcgggtaaaagtacggtgctgctgcaaaccttgtgcaaaatcgct
gagcaattgagttgtctttacgtaacaggtgaagagtcgctgcagcaggtcgctatgcgc
gccaatcggttggggctgcccaccgacaaactgcaaatgctgtcggaaaccagcgtcgaa
ctgatcgggcaggcggccgagcagctgcagcccaaggtgatggtggtggactcgattcag
gtggtgcatttatccgatattcaatcggcacctggttcggtatcgcaagtgcgcgaagcg
gcggcctatttgacgcgctttgccaaacaaactggcaccgtggttattttggtggggcat
gtaaccaaagacggatcactggcagggcccaaggtgcttgagcatatgattgactgctct
attttgctggagggttcacacgactcgcggtttcgcaccctgcgtggcaataaaaatcgc
tttggcgcggtgaacgagcttggcgtgtttgccatgaccgaaaaaggtctgaaagaggtc
agcaacccctccgccatttttttgcagcgcggcgacgaagtagcctcggggtcggtggtg
atggtgatgtgggagggcacccgcccgctgctggtggaaattcaagctctggtggatgac
agccatctgggcaatccgcgtcgggtggcggtaggtttggatcagaatcggttgtccatg
ttgcttgcggtgctgcaccgtcacggcggagtgctggttggcgatcaagatgtgtttgtc
aatgtggtgggtggcgtgcgtgtggccgaaaccagtgcggacttggcgttggtattggcc
atagtctccagttttcgcgaccgcccactggcgcacgatttaatggtgtttggcgagata
ggcctgtccggcgaaatccgccccgtacccagcggtcaggagcgtttgcgcgaagcggcg
aagcacggctttaagcgggcgattgtgcctattggcaatgctcccaaagcaatggatggt
attgaaatcgttgccgtaaaaagtctgagtgaagccctggcggccattgaatag
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