Gilvimarinus sp. DA14: NHM04_08330
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Entry
NHM04_08330 CDS
T08272
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
gil
Gilvimarinus sp. DA14
Pathway
gil00730
Thiamine metabolism
gil01100
Metabolic pathways
gil01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
NHM04_08330 (thiC)
Enzymes [BR:
gil01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
NHM04_08330 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
UTF61783
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Position
complement(1899781..1901697)
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AA seq
638 aa
AA seq
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MTQNKQSAERVLSESAQVDNASVQPFPRSEKIYVTGSRDDIRVPMREISLADTPTDFGGE
TNPPVRVYDTSGPYTDPAVAVDVRQGLADIRTRWIEERDDTELLEGVNSEFTRERLADPK
LAHLRFNHHRVPRRAKAGKNVSQMHYARQGIITPEMEYIAIRENMALAQAREQGVLEKQH
QGNDFGAAIPTEITPEFVRDEVARGRAIIPANINHPELEPMIIGRNFLVKINGNIGNSAL
TSSIEEEVEKLTWGTRWGADTIMDLSTGKNIHETREWIIRNSHVPIGTVPIYQALEKVDG
VAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLA
HHKENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIADANDEAQFGELETLGELTKIAWK
HDVQCMIEGPGHVPMHMIKENMDKQIECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMI
GWYGCAMLCYVTPKEHLGLPNKDDVKEGIITYKIAAHAADLAKGHPGAQLRDDALSKARF
EFRWEDQFNLGLDPDTAREYHDETLPKDSAKVAHFCSMCGPKFCSMKISQEVRDYAAENG
FGLDDSGEQVIRMLDVEAEMQAKAEEFRETGSQLYHKV
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgactcagaataaacagagcgccgagcgcgtgctcagtgaaagcgcccaggtggataac
gcctcggtgcagccatttccccgctcggaaaaaatttatgtaacaggttcgcgcgacgat
atacgcgtgcccatgcgggaaattagtctggccgatacccccactgattttggcggtgaa
accaacccgccggtgcgcgtttatgatacttctggcccctataccgacccagcggttgct
gtggatgtgcgtcaggggcttgcggatatccgcacccgctggattgaagagcgagacgat
accgagttgctggagggagtgaactcggagtttacccgcgagcgtctggccgaccctaag
cttgcccacctgcgctttaaccatcaccgggtcccgcgccgcgctaaggccggcaagaac
gtatcgcaaatgcactacgcccgtcagggcatcatcactccagaaatggaatacattgcg
attcgcgaaaatatggcgctggcgcaagcgcgcgagcagggggttttggagaaacagcac
cagggcaatgactttggtgcggctattcccactgaaattacccccgagtttgtgcgcgat
gaggtggctcgtggccgcgcgatcattcccgccaacattaaccacccagagttagagccg
atgatcatcgggcgcaactttttggtgaaaatcaatggcaatatcggcaattcggcgctt
accagctccattgaagaagaggtggaaaagctcacctggggcacccgctggggggcggac
acgattatggacttgtccacgggcaagaatattcacgagacccgcgagtggattatccgc
aactctcatgtacccattggcaccgtgcccatctaccaggcgctggaaaaagttgatggc
gtggccgaggatttaacctgggagatctttcgcgataccctgattgagcaggccgagcaa
ggcgttgactacttcaccattcacgccggtgtgctgctgcgctatgtgccgctcaccgcc
aagcgggtcaccggtattgtcagtcgcggtggctcgattatggccaaatggtgtctggcg
caccacaaagagaatttcctttatactcattttgaagacatctgcgaaatcatgaaggcc
tatgacgtgtccttctccctgggcgacggcctgcggccaggttcgattgccgatgccaat
gacgaagctcagtttggcgagctggaaaccctgggcgagctgaccaaaattgcctggaag
cacgatgtccagtgcatgatcgaggggccggggcatgtgcctatgcacatgatcaaagag
aacatggacaagcagattgagtgctgcgacgaagcgcccttttacactctagggccgctg
actactgacattgcccccggttacgaccatataacctcgggtattggcgcagccatgatc
ggctggtacggttgcgcgatgctctgttacgtcactcccaaagagcatttggggctgcct
aacaaagacgatgtaaaagagggtattattacctacaagatcgccgcccacgccgccgac
ctggccaaaggccaccctggggcgcagctgcgcgacgatgcgctatccaaggcgcgcttt
gaatttcgctgggaggaccagttcaatctggggctggatccggacaccgcacgcgaatat
cacgacgaaactctgccgaaagactcggccaaggtggctcacttttgttctatgtgcggc
cccaaattctgttccatgaaaatcagccaggaggtgcgcgactacgccgccgaaaacggt
tttggtttggatgacagtggcgaacaagtgattcgtatgctggatgtcgaggccgaaatg
caggccaaggcggaggagtttcgtgagacaggttcgcagctttatcacaaggtatag
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