KEGG   Gilvimarinus sp. DA14: NHM04_11925
Entry
NHM04_11925       CDS       T08272                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
gil  Gilvimarinus sp. DA14
Pathway
gil03030  DNA replication
gil03410  Base excision repair
gil03420  Nucleotide excision repair
gil03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:gil00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NHM04_11925 (polA)
   03410 Base excision repair
    NHM04_11925 (polA)
   03420 Nucleotide excision repair
    NHM04_11925 (polA)
   03440 Homologous recombination
    NHM04_11925 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gil03032]
    NHM04_11925 (polA)
   03400 DNA repair and recombination proteins [BR:gil03400]
    NHM04_11925 (polA)
Enzymes [BR:gil01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NHM04_11925 (polA)
DNA replication proteins [BR:gil03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     NHM04_11925 (polA)
DNA repair and recombination proteins [BR:gil03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     NHM04_11925 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NHM04_11925 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH HHH_2 HHH_5
Other DBs
NCBI-ProteinID: UTF59183
UniProt: A0A9J7A8U5
LinkDB
Position
2727699..2730425
AA seq 908 aa
MTDQSPVVLVDGSSYLYRAYHALPPLTNSRGEPTGAVKGVINMIRRLLKDYPGSPVAVVF
DAKGKTFRDELFAEYKAQRPPMPDDLRPQVEPIHEIVKAMGLPLLIEEGVEADDVIGTLA
AQAKEDGRPVVISTGDKDMAQLVNHRVTLVNTMTGSLLDEDGVREKYGFGPELMIDFLAL
MGDKVDNIPGVPGVGEKTAKALLQGVGGLDALYDNLEAIRELDFRGAKKMPEKLQDNKDQ
AYLSYELATIRLDVPLHVSVDEIALGEPDNDKLLALFERMEFKTWVDELAADPSVDSPVT
KPAEEVSVHYDTVLEKPEFDTWLQHLKDADYFAFDTETTSLHAMEAQIVGVSFAVEPGKA
AYVPVAHDYLEAPEQLDRDWVLAQLKPLLEDAGKAKVGQNLKYDRNVLANHGITLRGIAW
DTMLESYVFNSVAGRHDMDSLAQRYLDTSTIHFEDIAGKGAKQLSFNQIKVEDAAPYAAE
DADITLRLHRKLWPEIENDESLRRVLLDIEMPLVPVLADIERTGVLIDAAQLGKHSKELA
ERLVALEREAFDIAGKEFNLSSPKQLGVILFEELELPVVKKTKTGAPSTAEDVLQELALD
YPLPKLILEYRSLAKLKSTYTDKLPKMINPQSGRVHTSYHQAVAATGRLSSADPNLQNIP
IRTEEGRRIRKAFVAPKGYKVLAADYSQIELRIMAHLSKDEGLLHAFAEGLDVHRATAAE
VFATELDKVTDEMRRRAKAINFGLIYGMSAFGLGKQLGLPRNEAQGYIDRYFERYPGVAR
YMDETRALAHEKGYVETLQGRRLYLPEINARNKMLQQAAERTAINAPMQGTAADIIKLAM
VNVANWLADSDLDARIVMQVHDELVLEVAEKDANQVREGLIERMSQAAELTVPLIVEAEV
GDSWDEAH
NT seq 2727 nt   +upstreamnt  +downstreamnt
atgaccgatcagtcccctgtcgtccttgtggatggctcttcttacctctaccgcgcctac
catgcgctgccacctctgacgaactcgaggggcgagcccactggcgcggttaagggcgtt
attaatatgattcggcgtctgcttaaggattaccccggcagcccagtggctgttgttttt
gacgccaagggcaagacctttcgcgacgagttgtttgccgagtacaaggctcagcgccca
cccatgcccgatgatttgcgtccgcaagtggagcctattcacgaaattgttaaagccatg
gggctgccgctgttaatagaagaaggggtagaggcggacgatgtgatcggtactctggcg
gcgcaggctaaagaagatggccgcccggtggtgatctcaaccggcgataaggatatggcg
cagctggtgaatcatcgcgttaccctggtcaataccatgaccggaagcctgttggatgag
gatggtgttagagagaagtacggcttcggccccgagttgatgatcgattttctcgccctg
atgggcgacaaagtcgacaatattccaggggttccgggtgtaggggagaaaaccgccaaa
gccctgttacagggagttggtggcctggacgcgctttacgacaatttagaggctattcgc
gagctggacttccgcggcgcgaagaaaatgcctgagaagctgcaagacaacaaagatcag
gcttacttgtcttatgagcttgccaccattcgactggatgtccccttgcatgtaagcgtg
gatgagattgccctgggcgagcctgacaacgacaaactgttggccttatttgagcggatg
gagtttaaaacctgggtagatgagttagccgctgacccgtctgtagattcaccagttaca
aagcctgccgaagaggtgagtgttcactacgacaccgttttggagaagcccgagttcgac
acttggctgcaacatttaaaagacgccgattactttgcctttgataccgaaaccaccagc
ctgcacgccatggaggcgcagattgtgggtgtttcgtttgcggtagagcccggcaaggcc
gcctatgtgcccgtggcgcacgattacttagaggccccggaacagttagatcgcgactgg
gttctggctcaacttaagcccttattagaggacgctggtaaggccaaggtggggcaaaat
ctgaagtacgatcgcaatgtgctggccaatcatggcattaccctgcgcggaattgcctgg
gacaccatgctagagtcctatgtctttaactccgtggccgggcgtcacgatatggactcg
cttgcccagcgttacctggataccagcaccatccattttgaagatattgccgggaaaggt
gccaagcagctcagttttaaccagattaaggtcgaggacgcagcgccctacgccgctgaa
gatgccgacattaccctgcgtttgcaccgcaaactctggcctgagattgaaaacgacgaa
tccctgcgacgggtacttttggatattgaaatgccgttagtgcctgtgcttgccgatatt
gaacgcaccggggtgctgattgatgcggcgcagctgggcaagcatagcaaagagctggca
gagcgcctggttgccctcgagcgtgaagcctttgatattgccgggaaagaattcaattta
agttcgcccaagcagttgggggtgattctgtttgaagagctggagctaccggtggtgaaa
aaaaccaaaaccggtgcgccctctaccgccgaggatgtattgcaagagctggcattggat
tacccgctgcccaaactcattttggaataccgcagcctggcgaagttgaagtccacctac
accgataaattgccgaaaatgattaatccgcagagcgggcgggtacatacctcttaccat
caggcggtggcggccactgggcgattgtcgtcagccgatccgaacctgcagaatattcct
attcgcaccgaagaggggcggcggatccgcaaggctttcgtcgcacctaaaggatacaag
gtgctggcggcggactattctcagattgaattgcggattatggcgcatttgtcaaaagac
gagggcttgctgcacgcctttgctgaaggtttggatgtgcaccgggcgacggccgccgag
gtatttgccaccgagctcgacaaggtgaccgatgaaatgcgccgccgtgctaaggccatt
aacttcggccttatttacggtatgtctgcttttgggttgggcaaacagctggggttgccg
cgcaacgaggctcagggttatatcgaccgttatttcgagcgctacccaggagtggcacgc
tatatggacgagacccgtgccttagctcatgaaaagggttatgttgagacactgcagggg
cggcgtttgtatctgccggaaattaatgcccgcaataaaatgctgcaacaggccgccgag
cgcactgcaatcaacgcccccatgcagggcacagcggcggatatcattaaacttgccatg
gtgaacgtagcaaactggctagctgacagtgatctggatgctcgcatcgttatgcaggtg
cacgatgagctggtactggaagtggctgaaaaagatgcgaatcaagtgcgcgagggatta
attgaacgcatgagccaggcggcagagctaaccgtgccactgattgtcgaagcggaagtc
ggagatagctgggatgaggcgcattaa

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