Gilvimarinus sp. DA14: NHM04_12620
Help
Entry
NHM04_12620 CDS
T08272
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gil
Gilvimarinus sp. DA14
Pathway
gil00300
Lysine biosynthesis
gil00470
D-Amino acid metabolism
gil01100
Metabolic pathways
gil01110
Biosynthesis of secondary metabolites
gil01120
Microbial metabolism in diverse environments
gil01230
Biosynthesis of amino acids
Module
gil_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NHM04_12620 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NHM04_12620 (lysA)
Enzymes [BR:
gil01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NHM04_12620 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UTF59316
UniProt:
A0A9J7A4V7
LinkDB
All DBs
Position
complement(2892973..2894220)
Genome browser
AA seq
415 aa
AA seq
DB search
MSFFTERSGELTIEDVRLSDIAEQYGTPAYVYSRAAFTQHYLAYAQALGQHPGMICYAVK
ANSNIALLNLLARLGAGFDIVSGGEMERVLTAGGDPKRIVFSGVGKTAAEMAKALQVGIH
CFNVESEPELELLSQVAVEQGLTARVSLRVNPDVDAKTHPYISTGLKENKFGIDIARAPE
VYRRAAALPNIDVQGVDCHIGSQLTELDPFLDALDRLLVLVDGLADEGIHISHLDLGGGL
GVTYRDEVPPAVADYMAAIKAKLGGRKLALMFEPGRSIAANAGALLTKVLYLKPTEAHNF
AIIDAAMNDNIRPALYQAWQDIRPLKARRGEKKRWDLVGPVCETGDFLGKDRELALEPGD
TLAVMSAGAYGFTMSSNYNTRPRACELLVDGDQVHVIRERESFVDLIRGEHVIEH
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttttaccgagcgcagcggcgagctgaccattgaagacgttcgcctgagcgat
attgccgaacaatacggcacgcccgcctatgtctacagccgcgccgcttttactcaacat
tatctggcctatgcccaggcactcggtcaacacccgggcatgatctgctacgcggttaag
gccaactccaatattgcgctgctcaatctactggcccgcctgggcgcgggcttcgatatc
gtctcgggcggtgaaatggagcgggtgctgaccgctggtggtgacccgaagcgcattgtg
ttttcaggcgtgggtaaaaccgccgcagagatggccaaggcgctgcaagtaggcattcac
tgctttaatgtcgagtctgagcccgagctggaactgttgagccaggtagccgtggagcaa
ggattaaccgcgcgggtgtcgttgcgggtcaacccggacgtggacgcaaaaacccacccg
tatatttctaccggtttaaaagagaataaatttggtattgatatcgcccgcgcgcccgag
gtctatcgccgcgccgccgcactgcccaatattgatgtgcaaggtgtcgactgccatatc
ggctcgcaattaaccgagctggatccctttttggatgccctggatcgcctgctggtattg
gtcgatggcctggccgacgaggggattcacatcagccatctggatttaggcggtggcctg
ggcgtgacctatcgcgatgaggtaccgcctgcagtggccgattatatggccgctatcaaa
gccaagctcggcggtcgcaagctggcattgatgtttgaacccggccgctccatagccgcg
aacgccggcgcgctgctgaccaaagtactgtatttaaagcccaccgaggcgcataacttt
gccattatcgatgccgccatgaacgacaatatccgcccggcgctctaccaggcgtggcag
gatattcgcccgctgaaagcgcgccgcggcgagaaaaagcgctgggatttggtaggcccc
gtatgtgaaaccggcgactttttgggtaaagaccgcgaactggcgctggagcccggcgac
accctcgcggtgatgtccgccggcgcctacggctttaccatgagctcaaactacaacacc
cggccacgtgcctgcgagctgctggtagatggcgaccaggtacacgtgattcgcgagcgc
gaaagcttcgtcgatctgattcgcggcgagcacgtgatcgaacactga
DBGET
integrated database retrieval system