Gilvimarinus sp. DA14: NHM04_12945
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Entry
NHM04_12945 CDS
T08272
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
gil
Gilvimarinus sp. DA14
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gil03016
]
NHM04_12945 (truB)
Enzymes [BR:
gil01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NHM04_12945 (truB)
Transfer RNA biogenesis [BR:
gil03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NHM04_12945 (truB)
Prokaryotic type
NHM04_12945 (truB)
BRITE hierarchy
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Ortholog
Paralog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
UTF59377
UniProt:
A0A9J7A4F8
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All DBs
Position
2966424..2967374
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AA seq
316 aa
AA seq
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MGRKRKGRAIDGVLLLDKPLGMSSNHALQRAKRLFFAAKAGHTGSLDPLATGVLPVCFGE
ATKFSQFLLDADKTYEATFVLGEKTSTGDAEGEVLEDIDASELSEAQVASAMTRFMGEID
QVPPMYSALKQNGQPLYKLARQGIEVEREARQVEILEYNLLAFRPGQRAELDVEVHCSKG
TYIRSLAEDLGEALEVGGHVSALRRTFTGGFEIEQCITLDELSDERGEGRAETLDHHLLP
VDTPVDHLPKITLPADSAHYFRLGNPVMDAQVYRTGEEGDMVRVFCESGQFLGVATLDEG
RVAPKRLLASATSETN
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaagcgtaaaggtcgcgccattgacggtgtgctgctgttggataagccactg
ggtatgagctcgaaccacgccctgcagcgtgccaagcgtttattttttgccgctaaagcc
ggtcacaccggcagtctcgatcctctggcgaccggggttttacccgtatgttttggcgag
gccactaaattctcccagtttttgctggacgccgacaaaacctatgaagccacttttgtg
ctgggcgagaaaacctctaccggtgacgctgaaggggaagtgctggaagacattgatgcc
tccgaactgagcgaggcccaggtcgccagcgccatgaccagatttatgggggaaatcgac
caggtgccgcctatgtattcggcgctaaagcaaaacggccaaccgctctataaactcgcc
cgtcaggggatagaggtcgagcgcgaggctcgtcaggttgagatcctggagtacaaccta
ttggcgtttcgcccagggcagcgcgccgagctggatgtagaggtgcactgttctaaaggt
acttatatccgctcgttggccgaagaccttggcgaggcgcttgaggtgggcggccatgtc
agcgctttgcgccgtacctttaccggtggttttgagattgagcagtgtataactctggat
gagctcagcgatgaacgcggtgaggggcgggccgaaaccttggatcatcacttgttgccg
gtggatacgccggtggaccatctgcctaaaatcacacttccagcggatagcgcccactat
tttcgcctgggtaatccggttatggacgcgcaggtctatcgcacgggcgaagaaggtgat
atggtgcgtgtcttttgtgaaagtggccaatttttaggcgttgccaccctcgacgagggc
cgggtggcgcccaaacgtctgttggcgagcgccacatccgagacaaactga
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