Gilvimarinus sp. DA14: NHM04_15440
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Entry
NHM04_15440 CDS
T08272
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
gil
Gilvimarinus sp. DA14
Pathway
gil00521
Streptomycin biosynthesis
gil00523
Polyketide sugar unit biosynthesis
gil00541
Biosynthesis of various nucleotide sugars
gil01100
Metabolic pathways
gil01110
Biosynthesis of secondary metabolites
gil01250
Biosynthesis of nucleotide sugars
Module
gil_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NHM04_15440 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NHM04_15440 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NHM04_15440 (rfbC)
Enzymes [BR:
gil01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NHM04_15440 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UTF59844
UniProt:
A0A9J7A690
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Position
complement(3508853..3509443)
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AA seq
196 aa
AA seq
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MKITPQAIADVLLIEPKVFGDARGYFFESFRQDIFEAATGYPVNFLQDNESFSARGVLRG
LHYQRAPYAQSKLVRVIQGEVIDVAVDIRVGSPTFGQHVAARLSSDNKHQLFVPRGFAHG
FVVLSETAIFSYKVDNLYAPEHDSGIHFADQDLAIDWGINAQLIQTSDKDRALPSLNEKL
NRDPDSLFRYEHNLYE
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
gtgaagattaccccacaagccattgctgacgttttattaatagagcccaaggtatttggc
gatgcccgaggttattttttcgagtcttttcgtcaagatatttttgaggcggccactggt
tatccagtcaacttcctgcaagacaacgaatctttttcggcgcgcggtgtcctgcgcggc
ttgcattaccagcgcgcaccctacgcacagagcaaactggtgcgggttatccagggcgaa
gtcatcgatgttgcagttgatatccgtgtcggcagcccaacatttggccaacacgttgcc
gcacgcttaagtagcgacaacaagcatcagctatttgtccctcgcggctttgcccatggc
tttgtggtattgagcgagaccgcgattttcagctacaaagtcgataacctttacgccccc
gagcacgacagcggcattcactttgccgatcaggacctggccatcgactggggcataaac
gcgcagctgattcagacttcagacaaagacagagcactgccctctctgaatgaaaaactc
aatcgtgatccggactcactttttcgctacgagcacaatctgtacgagtaa
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