Gimesia benthica: F1728_01235 Help Entry F1728_01235       CDS       T06296                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism gim  Gimesia benthica Pathway gim02020   Two-component system gim02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:gim00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     F1728_01235 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     F1728_01235 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:gim03021]     F1728_01235 (rpoN) Transcription machinery [BR:gim03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      F1728_01235 (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_Crp_2 HTH_23 LacI Motif Other DBs NCBI-ProteinID:  QGQ21401 UniProt:  A0A6I6A8P6 LinkDB All DBs Position complement(281283..282773) Genome browser AA seq 496 aa AA seqDB search MHLNISQQMKLGQQMKLAPRMIQSMEILQLPLQALEERIDQELAENVCLERVSDTEGTTD TETELMRSQADDDANSYKLDEKEMVAGNETNNESDFERLLEMAEQWPEDNVTSATKPSSN RISEDIERNNDAVANISERQQTINEYLLEQFHYFSCSHEIKEFGEYLIQNLDHNGRLQSS LPEIVQVYGKPISQEEAETALHLIQKCDPPGVGARDLKECLLLQLKPDAPYRDVLVTLIT SHLEDLGQNRLPVIQRKTGYSIDTIKNAMSYLRYLDPFPGRGFESEPVLKVTPDVFVKKD ENGKYVVELENEYTPPLRISRHYAQLLRNKNDDQTKDYIKKKIDAAKWLIEAIEQRHSTL KRVAQAIVDFQTDFLDNGPEYIVPLKMQQIADVVGVHVTTVSRAVDDKWIQTPRGLYPLK RFFGGGTKTSDGEDVAWGIIRLKMKEIIDGEDKSKPLSDDALVDALAKEGYNLARRTVTK YRKAMNIPSSRQRREY NT seq 1491 nt NT seq  +upstreamnt  +downstreamnt atgcatctgaatatttcacaacaaatgaaactgggccagcagatgaagctggctccccgg atgatccagtccatggagattctgcaactcccgttacaggcgttggaggaacgcattgac caggaactggcagagaacgtctgtttggaacgggtcagtgatactgaagggacgacggac accgaaacggaactgatgcggagtcaggctgacgacgatgccaacagttacaagctcgac gaaaaagagatggtcgccggcaacgaaaccaacaacgagtccgatttcgaacgactgctc gagatggcagaacagtggccggaagataatgtgacttcggcgaccaagccttcgtcgaac cggatcagcgaagacatcgagcgcaacaacgatgcggtcgccaatatttcagaacgccag cagaccatcaatgaatacctgctggaacagtttcattacttctcctgttctcacgagatc aaggaattcggcgaatatctgattcagaacctcgaccataatggtcggttgcagagttcc ctgcccgagatcgtgcaggtctatggaaaaccaatttcgcaggaagaggccgaaaccgcc ctgcacctcattcagaaatgtgatcctcccggcgtgggggcgcgggatttgaaagagtgt ctgctcctgcaacttaagccggacgctccctatcgcgatgtgctggtcaccctgatcacg tcacacctggaagatctgggacaaaaccggttgcctgtcattcagcgaaagaccggctac tcaatcgacaccattaaaaatgcgatgtcctatctgcgttacctggatccatttcccgga cgtggatttgaatcagaaccggtcttgaaagtgacgccggatgtctttgtcaaaaaagac gaaaacggcaagtacgtggtcgaacttgagaatgagtacacaccaccactgcggatcagc cggcattacgcacaactgctccgcaataaaaatgacgatcagaccaaagactacatcaag aagaagatcgatgctgccaaatggttgattgaagccatcgagcagcggcatagcactttg aagcgtgtggcgcaggcgattgtcgacttccagaccgactttctcgacaacggtccggaa tacatcgtccccctcaaaatgcagcagatcgcagatgtggttggcgtgcatgttacgact gtctcgcgtgccgtcgatgataaatggatccagactccgcgtggcctgtatcctctcaag cgtttctttggcggtggtaccaagacctccgacggggaagacgtggcctggggcattatc cgtctcaagatgaaagagatcatcgatggggaagacaaaagcaaaccgctcagtgatgac gcactggtcgatgccctggcgaaggaaggttacaacctcgcacgacgaaccgtaaccaaa tatcgcaaagcgatgaatatcccctcatcccgacagcggcgtgagtattaa

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