Gimesia benthica: F1728_01605
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Entry
F1728_01605 CDS
T06296
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
gim
Gimesia benthica
Pathway
gim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F1728_01605 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gim03019
]
F1728_01605 (recQ)
03400 DNA repair and recombination proteins [BR:
gim03400
]
F1728_01605 (recQ)
Enzymes [BR:
gim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F1728_01605 (recQ)
Messenger RNA biogenesis [BR:
gim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F1728_01605 (recQ)
DNA repair and recombination proteins [BR:
gim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F1728_01605 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
RIIa
Motif
Other DBs
NCBI-ProteinID:
QGQ21468
UniProt:
A0A6I6A6B6
LinkDB
All DBs
Position
371051..372886
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AA seq
611 aa
AA seq
DB search
MAETGMDDALLDVLHEYWGYSEFRPLQQSAMTSVLEGRDSLVVLPTGGGKSLCYQAPALC
MEGTAVVVSPLISLMKDQVDTLRVCGISAACLNSSLDQEEARQVFRDLRAGKIKLLYVAP
ERLMLEGMLSMLAEIKLAYIVIDEAHCVSMWGHDFRPHYRELQELKRIFPQCGIHAYTAT
ATELVRNDIASQLGLQDPELLIGSFDRPNLSYTVARRSNRFSQVCEVIDRHPDEPGVIYC
ISRADVESLSESLNDAGYETRPYHAGLPDAERAANQEAFIQDQIDVIVATIAFGMGIDKP
NVRYVIHAGLPKSLENYQQESGRAGRDGLEAECVLLYSEQDAMIWQRILEDQPDESKASA
FESLQAMQNYCHAFDCRHRYLMRHFGQDLEEDCETACDLCRGEFKQVDDAQVIGQKILSS
IYRQDQNFGASYTAAVLKGSKDKKVLNNGHDQLSTYGLLKGESLATIRSWLNQLMSQGFL
TKTAEYQQLRITKTGWQLLKGEATPQLMRTTQDGQAEKSQRSRDKFDNLNWKGVDKGLFE
VLRELRKQIAGEKGIQPYMVFGDATLRELARHKPSNTAQFLEVWGVGQKKCDDFGAPFLE
SIADFENESQD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacagggatggacgacgcgttactggatgtcttacacgaatactggggatat
tccgaatttcgccccctgcagcagtctgcgatgacctcggtgctggaaggtcgcgactcg
ctggtcgtactgccgaccgggggtgggaaatcactctgctaccaggctcctgcgctctgt
atggaaggaaccgcggttgttgtcagcccgctgatttccctgatgaaagaccaggtcgat
acgctccgcgtctgtggcatctccgccgcctgtctcaacagctccctcgaccaggaagaa
gcccggcaggtctttcgcgatctacgggcaggcaagatcaaactgctgtatgtcgccccc
gaacggctcatgctcgagggtatgctcagtatgctcgccgaaatcaagctggcttatatc
gtcatcgatgaagcacactgcgtgagtatgtggggacacgactttcgccctcattaccgg
gaactccaggaactgaaacgcatatttccgcagtgcggcattcacgcttacaccgccacc
gcgacggaactggttcgcaacgatattgccagtcagctcggactgcaggatccggaactg
ctcatcggctcgttcgatcgtcccaatctgagttacaccgtcgcccgccggagcaatcgc
ttctcacaggtctgtgaggtcatcgatcgccacccggatgaaccgggggtgatttactgt
atctcccgggccgatgtggaatcgctgagtgagtcgctcaacgacgccggctacgaaacg
cgcccctatcacgcaggcttgcccgatgcagaacgtgcagccaaccaggaagccttcatt
caggatcagatcgatgtgatcgttgccaccatcgcgttcggcatgggcatcgacaagcct
aacgtccgctatgtaattcatgcaggcctgcccaagtcactggaaaattaccagcaggaa
agcggtcgggcagggcgggacggtcttgaagccgagtgcgttctgctctattccgagcag
gatgcgatgatctggcagcggatcctcgaagatcagcctgacgaatccaaagcaagcgcc
tttgaatcactgcaggcgatgcagaactactgtcacgcgttcgactgtcgacaccgctac
ctgatgcggcactttggtcaggatctggaagaggactgcgaaacggcctgcgatctctgc
cggggggaattcaagcaggtcgacgatgcccaggtgataggtcagaaaatcctctcctcg
atctatcgtcaggatcagaattttggagcatcctataccgcagcagtcttgaagggttcc
aaagacaaaaaagtactcaataacggacacgaccagttgagtacctacggtctgttgaaa
ggggaaagcctggcgacaatccgcagctggctcaaccagctgatgtcccagggattcctg
accaagacggcagaataccagcagttgcgaatcacaaagaccggctggcaactcctcaaa
ggggaagcaactccacagctcatgcggaccacacaggacggtcaggctgaaaagtcacag
cgttcccgcgacaagttcgacaacctgaactggaagggggtcgataaagggctgttcgaa
gtgctccgtgaactgcggaagcagatcgctggtgaaaaaggaattcaaccctacatggta
ttcggcgacgccacgctgcgggaactggcccgccataaaccgtcaaacacggcacaattc
cttgaagtctggggcgtgggtcagaaaaagtgcgatgatttcggggctccgttcctggaa
tcgatcgcagattttgagaatgaatctcaagactga
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