Gimesia benthica: F1728_02140
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Entry
F1728_02140 CDS
T06296
Name
(GenBank) helicase SNF2
Organism
gim
Gimesia benthica
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SNF2_assoc
DEAD
ResIII
SWIM
Motif
Other DBs
NCBI-ProteinID:
QGQ21561
UniProt:
A0A6I6A981
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Position
complement(512352..515678)
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AA seq
1108 aa
AA seq
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MTLAELLENQFRADIRFRGAAYIEAERVELTRVTADHVFAVVRDGVEYQTQLSRDDGNLK
TYCTCDQFQKFNVCKHLWASILAVDVAGYLTGSVKPGYIPPFIIENTPIAFDEEDDDYDF
SMPSDFELGSGRSRKSKSSGEQSTAVTSRPRLREWETKLVELKNDFALTPVLSKTTQQER
EIFYEIDVEESQESGQLVVQTSQRQRRANGQWGKLKPLKLKVGQLQEVEHEDDRRILAYL
SGGTPERTNWRAQQTETQMAAFRYRVPYELCELILPLMCGTGHVRYLDRQPDDVDSLVWD
GEHAWEFRMGVEHDRKESTWKLNGHLKRENDTLEISDARLIVAGGLVLTRDKITPLEDYD
AFPWIKMIQMNETIEVDEGEQQELVDRLLDMPVLPRLELPEELHLEEITCEPSPELLIHS
PQKKRWQQDRLFGEIHFNYLDHLVSGSSTQWAIVDRQEKRCILRDREKESQAWTLLQDSG
FRRLLDRRVQGRDVEIAARDLGGAVREMINAGWVVRADGKQVHQPSNMMFKVQSGIDWFE
LHADIDFEGQTVKFPELLSALARGDSSIRLDDGSLGILPEEWIEQYGILAGLAVTDEEHL
RFAPNQVALLDALLSSQEFVETDAKFDEMRDKIRNFSGIALDKEPAGFEGGLRKYQLEGL
GWLQFLQDFHFGGCLADDMGLGKTVQLLALLLRRKKGREGHLPSLAVVPKSLMFNWMQEA
AKFTPELKVVEYAGGDRGKLIDSLEEYDLVLTTYGTMRRDITQIKDIQFDYAVLDEAQMI
KNSGSQVAKASRLLQAKHRIALSGTPVENHLGDLWSIFEFLNPGMLGRSSVFKAYTNDIE
DKNARLLLGNALRPFILRRTKEQVANELPDKVEQTLYCDMGKDQTRLYDELRQHYRDSIL
GMVESKGLGKTKIHVLEALLRLRQAACHPALLERGRALDASAKMDVLIPHLEELIEEGHK
ALVFSQFTSMLSIVQEHLDQKEIVYEYLDGQTRDRKERVDRFQTDKDCGVFLISLKAGGL
GLNLTAADYVFILDPWWNPAVETQAIDRAHRVGQTKRVFAYKLICRNTVEEKITELQQQK
RELADAILEENQSVLKNLSSEDLELLLS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgacgttagcagaattactggaaaatcaatttcgtgcggacattcgtttccgtggagcg
gcttacattgaagccgaacgggttgaactgactcgcgtgaccgcagaccatgtgtttgcg
gtggtcagagatggtgtagagtatcagactcagctgtcccgcgatgacggcaatctgaag
acgtattgcacctgcgatcagtttcagaagttcaacgtctgtaaacatctctgggcttct
atcctggcggtagatgtggcgggctacctgaccggttcggtcaagcctggttacattcct
cccttcatcatcgaaaatacgccgattgccttcgatgaagaagatgacgactacgatttc
tcaatgccctccgatttcgagctgggcagtggtcggtctcgcaagtcaaagtcgagtggg
gaacagtcgacggcagtgacttcgcgtccgcgactgcgcgagtgggaaacgaaactggtt
gaactgaaaaatgatttcgccctcacgccggttctgtctaaaaccacgcaacaggaacgt
gagatcttctacgagattgatgtagaagagagtcaggaatctggacaactggtcgtgcag
acttcacagcgtcagcgaagagctaacggccagtggggcaagctgaagccactcaagcta
aaagtcggccagctgcaggaagtcgaacatgaagatgatcgccggattctggcgtacctc
tccggcgggacacctgagcggaccaactggcgagcccagcagaccgaaacacaaatggct
gcgttccgctatcgggttccgtatgagctttgtgagctgattcttccgctgatgtgcggt
acaggacacgtgcgctacctggatcgacagcctgatgacgtcgattccctggtctgggac
ggcgagcatgcctgggaattccggatgggagttgagcatgaccgcaaagaatcgacatgg
aaactgaatggtcatctgaagcgagaaaacgatacgctggaaatctctgatgcccgtctg
attgtcgcgggaggactggtactgacccgcgataaaatcacgcctctggaagattacgat
gcatttccctggatcaaaatgattcagatgaatgagacaattgaagtcgatgaaggcgag
cagcaggaattggttgaccgcctgctggacatgcctgtcctgccccgactggaactgcct
gaagaactgcatctggaagagattacctgcgagcccagtccggagttactgattcattct
ccgcagaagaaacgctggcagcaggatcgcctgttcggcgagattcattttaattatctc
gatcatctggtttcgggaagcagtacccagtgggcgattgtggatcgccaggaaaaacgc
tgcattcttagagaccgtgaaaaagaatcccaagcctggacactactgcaggatagtggt
ttccgtcgcctgttggaccgccgggttcaggggcgcgatgtggaaattgctgcccgtgac
ctggggggggctgttcgcgaaatgatcaatgccggctgggtggttcgcgccgatggtaaa
caggtccatcagccttccaatatgatgttcaaggtccagtctggaattgactggttcgaa
ctgcatgcagatatcgattttgaaggccagacggttaagtttccagagctgttatcagca
ctggcccgcggtgattcgtcgattcgactcgacgatggctcactgggaatcctgccggaa
gagtggatcgaacagtacggcattctggccggattggcggtcactgatgaagagcatctt
cggtttgctcccaatcaggtagcactgctggacgctctgctgagttcacaggaatttgtt
gagacagacgccaaattcgatgaaatgcgggataagatccggaacttttcagggattgcc
ctggataaagaaccagccggattcgaagggggcttgcgtaagtatcagctcgaaggttta
ggctggctgcagttcctgcaggacttccactttggtgggtgtctggctgatgacatgggg
ctgggtaaaacggtacagctgctggccctgttgttacgtcgtaagaagggccgggaagga
catctgccttcactggctgtcgttcccaagtcgctgatgttcaactggatgcaggaagcc
gccaaatttacgcctgagttgaaagttgtcgagtacgcgggcggggatcgaggcaaactg
atcgattcgctggaagagtacgatctggttttaacgacctatggcacgatgcgtcgcgat
attactcagatcaaagatatccagttcgattatgctgtgctggatgaagcccagatgatt
aagaactcagggtcgcaggttgcgaaggcatcgcggctgctgcaggcaaaacatcgaatc
gcattgagtggtaccccggtggagaaccatctgggagatctgtggtcgatcttcgagttt
ctcaatcccggaatgctgggacgcagttcggtgttcaaagcttataccaacgacatcgaa
gataagaatgcccggctcctcctggggaatgcgttgcggccgtttatcctgcggcgaacc
aaggaacaggtggctaacgaactgcctgacaaagttgagcagacgctctactgcgatatg
ggcaaagatcagacccgtctttacgacgaactccgacagcattaccgggactcaatcctg
gggatggtcgaatccaaggggctggggaaaaccaaaatccatgtgctggaagcactgctc
cggctgcgacaggcagcctgccaccctgctctgctggaacggggacgcgcactggatgct
tcggccaagatggatgtgttgattccacacctggaagaactgatcgaagaaggtcacaag
gctcttgtcttttcacagttcaccagcatgttgtcgattgtgcaggaacacctggatcag
aaagagatcgtctacgaatacctggatggacagacgcgcgatcgtaaagaacgcgtcgat
cgattccagaccgataaagattgtggcgtgttcctgatcagtctcaaggctggtggttta
ggactcaacctgaccgctgcggattacgtcttcattctggatccctggtggaacccggct
gtggagacgcaggcgatcgaccgggcacaccgtgtcgggcagaccaaacgggtatttgcc
tacaagctgatctgtcgcaatacggtggaagagaagatcactgagttacagcagcagaaa
cgcgaactggccgatgcgattctggaagaaaaccagagcgtcctcaagaacctgtccagc
gaagatctcgaactgctgctctcttaa
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